Cyphomyrmex costatus: 108779946
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Entry
108779946 CDS
T11118
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03440
Homologous recombination
ccoa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108779946
03460 Fanconi anemia pathway
108779946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccoa04121
]
108779946
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108779946
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108779946
Ubiquitin system [BR:
ccoa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108779946
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108779946
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108779946
FA (Fanconi anemia) pathway
Downstream FA components
108779946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA-2_OB1
BRCA2
BRCA2DBD_OB2
Tower
SurA_N_3
Motif
Other DBs
NCBI-GeneID:
108779946
NCBI-ProteinID:
XP_018403019
UniProt:
A0A151I9X1
LinkDB
All DBs
Position
Unknown
AA seq
1643 aa
AA seq
DB search
MDIPETDNSEDESDELFSDDEQKEIKHKSKVCQDISILSRSETPLLLLDSPSTIMPTDAV
IPSTPLSLLPFLSKINEQWSSDLETPQAESRTMSTSATTEETPKVEQHTPDVSSVKSIEK
IISDSPIIVSRASRRRSKRRIFRSSISIDPLDVIDNEDITANVQVETPVISDNTNSIAQD
DTTNAAISTPSLKTALKDNKPKVLSKSQDICNNEESKNFTNNVPDSLNTSTQEFFSNVSF
SKIDELCSDTFNNKKTMETTVTQCNYEQNIDKGRNIEENENIGFFTARGTSINVSKQALF
KAKRLFADMDESAFEMDEMQTQNYEPPAKKNKSNEEKNRDLPSSSFVNNASVNVAKETSK
PKPLIEQLKNYDNVYTVNCKQPFVSKSSNEEVNKVPILLSTASGNPINISKKALLKAKAL
LVDESHNIDDDELIKCYERSTNKNFPIKIQTLPPFSATSGKSIISGESPVKAKTLFAEHL
DDTTEVVVAEETDVHNKKTKGLEIKMSNIKFKSPASVVGISKQISEAKIFDKRLDDQLEP
TIANEVKINDKVENMQEIKVPSIGFQTAGGTFINISERALSRAKALFADELDCPLEMNIL
KNSSRDEEKIKKCDLTIPHGGLQTASGQEVPVSNNAALIARELFFNDCLDESNPDLGRAS
LQKRKLSETNVDGSTPQGRNYTSEIRKNRLSGEFQARKLFSDSTSASTDNDENRDPDKKR
QTSPIVDSISKSPNKDPIESTESETAGSPVIGRQSSLRKRKNLGYQRDEYNASRADNKMP
DNENVALQEIVQGSAACGKIDDDKLNTEEPTQAAQGNAKGNSAALNEYGDTQMMMDFIDQ
STTILQNRLAATLEQEAIITVKRRQAPSEGSKQSMGHLYRYKQINSNARLSMRKVSGGVP
PMPCSYRELINRRISPRILEITAMTAATYKFRCSDFYGDNVAHSNVHGIEMEDGVRLILD
ENGYMGVWEFLRAFLASPGVDPNLVPARWVENHYRWIVWKLASMDRMKFGSTKLPRALTP
SHVMAQLKYRYDREIDRSQRPAIRRILEKDDVASKRMTLCVSSIIQDSNVSMEVGKSPHI
GMPKWRIELTDGWYSINTCIDISMMKNISTGKIREGTKLVLSGAELLNCDQGFYPLETPA
DVCLKLHTNSTRRARWDTKLGYAPRSGPIPIKLRNVCPSGGLIGKMTIVVARVYPMLYHE
KTASGDSIVRNAKSEEKAQNKYEQQCWSKIESFYAEAEDFQGKGLSCETNDLVIQLSEDY
EILSTEESVSKKRYDELLQELHQKEERFKQRMQSKLRESLPGPRQVSQLLKVRVCDKNAN
AILSVWSPSEEVVDALKEGACVSLCNIVASGKRGTELQLTARRSAIFKPGKMHDTSYPAR
VCTSLDEIANSEFVPPYGEFDTIGFVCSVGPAPYGMRDFDAVHLAYRKAGSSESSYLSIL
FWQGIASYGYTEILTVGSIVACSNLEWRRATSWNVPAAYCTDRSTFTRNPRRNHLYESFE
NLRNLITDPIKYAESCTLELNVELQKKLTPTRYSTGKNTPIKIYSSTSSADKKLVDYTSP
LATPKLGMDNHSNFIASNPSIKKRLEKLQQYGEAPQLSPIVLKNSKRICLDFRSPILPIS
DANSTKETTNQPGELNLSSTSEK
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggatataccagagactgacaactctgaagatgagtctgacgaattgttctcagatgac
gaacaaaaggagattaaacataaatcgaaggtctgccaggatatctcaattctaagtcgg
tctgagacacctttgttgttactggatagtcccagtacgataatgccaactgatgccgta
attccatctacaccattgagtctgttaccatttttaagtaaaataaatgaacagtggagt
agcgacttagagacaccacaggctgagtctcgtacaatgtcaactagtgcaacaacagaa
gaaacacctaaggttgaacaacatactcctgatgtttcaagtgttaaaagcatagaaaaa
attatttctgattcccctattattgtctctagagcgtcacgaaggcgttccaagcgtcgt
atatttagatcttctatatctatagatccattggatgtaattgacaatgaagatattact
gcaaatgtacaagtagaaacacctgttatttctgacaatactaattccatagcacaagat
gacactacaaatgcggcaatatccactccgtctcttaagactgctcttaaagataacaag
ccaaaagttcttagtaaaagtcaagacatatgtaataatgaggaatcaaaaaattttacg
aacaatgtacctgatagtttaaacacatccacgcaagagttttttagtaatgtctcgttt
agtaagatagatgagttatgttcggacacttttaacaataaaaaaacaatggagactact
gtcacacaatgtaattacgaacagaacattgacaaaggaaggaatattgaggagaatgaa
aatataggtttttttactgctcgtggtacttcaattaatgtatcaaagcaagcgttattt
aaagccaagagactgtttgcagacatggatgaatctgcctttgagatggatgaaatgcag
acacagaattatgaaccacccgctaaaaaaaataaatctaatgaagagaaaaatagggat
ttaccatcttcttcattcgttaataatgcttctgttaacgttgcgaaagaaacatccaaa
ccaaaaccgcttatagaacaattgaaaaattatgacaatgtgtatactgtaaattgtaaa
caaccatttgtaagtaaaagttctaatgaagaagtcaataaagttcctattttattatca
actgccagtggcaatccaattaatatctcaaaaaaagcattgttaaaagcaaaagcatta
ttagtggatgaatcacataatattgatgatgatgaattaataaaatgttatgagagatct
accaataaaaattttccaataaaaatacagactttaccaccattttctgcaactagtggt
aaatctattatctcaggagaatcaccagttaaagcaaaaacgttgttcgcagaacatttg
gatgatacaacagaagtagtcgttgcagaagaaaccgatgttcataataaaaaaacaaaa
gggttagagataaaaatgtcaaatattaaatttaaatctcctgctagtgtcgttggtatt
tctaaacagatatcggaggcaaaaatatttgataaacgattggatgatcaactggaacca
acaattgcaaatgaagttaaaatcaacgataaagtagaaaacatgcaagagataaaagtt
ccaagtattggatttcaaaccgctggtggaacatttatcaatatctcagaacgagcgtta
tccagagcaaaagcgttatttgcggatgaattagattgtcctttagaaatgaatattctt
aaaaatagtagtcgcgatgaagaaaagataaaaaaatgtgacttaacaattccacatggt
ggattgcaaactgcaagcggtcaagaggtaccggtttcgaacaatgctgcattaatagca
cgagaattattcttcaacgactgcctggatgaaagtaatcctgacttggggcgcgcatcg
ttgcaaaagcgcaaactaagcgagactaatgtagacgggagcacaccgcaaggcagaaat
tacacgtccgaaataagaaagaatcgtctcagcggcgaatttcaagcaagaaaattgttt
tccgatagtacgagtgctagcacggataatgacgaaaatcgagatccggataagaaaagg
caaacttctcccattgtagattctatctcgaaatcgcctaataaggacccgatagaatca
accgaatcggaaacagcgggcagtcctgttataggaaggcaatctagtttgaggaaacga
aagaatttaggatatcaaagggacgaatataatgcatcacgagcagataataagatgcca
gataacgagaacgtagcattgcaagagattgtgcaaggaagcgcggcttgcggaaagatt
gacgacgataaattaaatacggaggagccaacgcaagccgcgcagggaaacgcaaaaggc
aatagcgcggcgttgaatgagtacggcgacactcagatgatgatggattttatcgatcaa
tcgacgacgatcctgcagaatcgcttggcagccaccttagagcaggaggcgataatcacc
gtgaagaggagacaagcgccatcggaaggatcgaagcaatcgatgggccacctgtaccgt
tacaagcagattaattctaacgctcgtttgtcgatgaggaaggttagcggtggtgtgccg
cctatgccatgttcctatcgggagcttattaatcgacggatatcaccgagaatcctggag
atcactgctatgaccgctgcgacgtacaaattccgttgctccgacttctatggggacaac
gtggcgcatagtaacgttcatgggatagagatggaggacggtgtgcgtttgattctggat
gagaatggatacatgggggtgtgggagtttcttcgcgcatttcttgccagtccgggtgtc
gatccgaatctcgttcccgcacgctgggttgaaaatcattatcgatggattgtgtggaaa
ttggcgtcgatggaccgaatgaaattcggctcgaccaagttaccaagggcattaacacct
tcacacgttatggcacaattaaagtatcggtacgatcgagaaatcgaccgatctcagcga
ccggcaataagacgcattttagaaaaggatgatgtagcatctaagagaatgactttatgc
gtgtcatctataatacaagatagtaacgtaagtatggaagtagggaaaagtccgcacata
ggaatgccaaaatggagaatagaattaactgatggctggtacagtataaatacctgtatc
gatataagcatgatgaagaacatatcgactggtaaaataagagagggcacgaaattagtg
ttgtccggcgcggaattactcaactgtgatcaaggtttctatccactcgagacaccggct
gacgtgtgcttgaaattgcacacgaattcaaccaggcgcgcacgatgggacacgaaatta
ggatacgcgccacgttcggggccgatacccatcaagttacgtaacgtgtgtccgagcggc
ggtttaatcggcaaaatgacgattgtcgtcgctagagtgtatccgatgttatatcacgag
aaaaccgcatccggagattcgattgtcagaaatgctaaaagcgaagagaaagcgcaaaac
aaatacgagcagcaatgttggtccaagatagaatcgttctatgctgaagcagaggacttt
caaggaaaaggactttcttgcgaaactaatgatctggtgattcaactgagcgaagattac
gaaatattgtccacggaggaatccgtctctaagaaacgatatgatgaattgctgcaagaa
ttacatcagaaggaggaacggttcaaacagaggatgcagtcaaaattacgcgagagcttg
ccggggcctcgacaagtctctcagttacttaaagttcgcgtgtgtgacaaaaatgcgaat
gccattctctccgtttggtcgcctagcgaagaggttgtcgacgctctcaaagaaggcgcg
tgtgtttcgctctgcaacatcgtggcttccggaaagaggggtaccgaattgcaactcact
gcacgtcggtctgcaatctttaaaccgggaaagatgcacgatacatcttatcccgctaga
gtgtgtacgtcgctagacgaaatagcaaattccgagtttgttccaccttatggagagttt
gatacgatcggtttcgtttgttcagtcggtcctgctccttatggtatgagagactttgat
gctgtacatttggcatatcgtaaagcgggttcgagcgaatcttcgtatctttcaatattg
ttttggcaaggaatagccagttacggttatacagagattcttaccgtcggatctattgta
gcttgcagcaatttagaatggcgaagggcaacttcgtggaatgtcccagcggcgtattgc
acggatagaagtacctttacgcgtaatcctcgccgaaatcatttatacgaatccttcgaa
aatctgcgaaatctgatcacggatccaattaagtacgctgaaagctgcactttggaactt
aacgtggaattgcaaaagaagttgacgcccacgcgctactcgacgggtaaaaatactccg
attaaaatatacagttcgacgtcaagtgccgataaaaaattggtcgattatacgtcgccg
ctggcgacgccgaaattgggaatggataaccactcgaattttatcgcatctaatccctcg
attaagaaacgacttgagaaactccaacaatatggcgaagcgcctcaactatctcccatt
gtactaaaaaattcaaagaggatttgtttggattttcgatcacctatccttcctatttca
gatgcaaactcgacaaaggagacaacgaatcaacccggagaattaaatttatctagtacc
tcggaaaagtaa
DBGET
integrated database retrieval system
