Cyphomyrmex costatus: 108780079
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Entry
108780079 CDS
T11118
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04145
Phagosome
ccoa04512
ECM-receptor interaction
ccoa04518
Integrin signaling
ccoa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108780079
04518 Integrin signaling
108780079
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108780079
09142 Cell motility
04820 Cytoskeleton in muscle cells
108780079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108780079
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccoa04147
]
108780079
00536 Glycosaminoglycan binding proteins [BR:
ccoa00536
]
108780079
Membrane trafficking [BR:
ccoa04131
]
Endocytosis
Phagocytosis
Opsonins
108780079
Exosome [BR:
ccoa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108780079
Exosomal proteins of colorectal cancer cells
108780079
Exosomal proteins of bladder cancer cells
108780079
Glycosaminoglycan binding proteins [BR:
ccoa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108780079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
COMP
EGF
Motif
Other DBs
NCBI-GeneID:
108780079
NCBI-ProteinID:
XP_018403168
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MRVPILLILVLLVIYAVDGSVIPDRALTASLQDAWYDDEFIIAISNFKDKKKSSSGSVET
LLAVKYRGVKTKLVLLLDRRTKRVILESLDEAGQRSASHVKVDSLTVNTPLKSLIMLVHQ
AQPNPRVDVYVDCTYEGSIPFKTTFRDIAEIEDNLDVEVFRERKCRTKVYQSATITDVLR
KEQCPDNLPKMKQPSVFDTDTPKTQPTDSDEDYQNKPTDQPDESSDEINGPNLPGQNNNG
LSPSSNSKFPWDHKKPSDKKHHGGHPNDSNRPKKKDSSGYPKDKNKPNKYDPYDSSDPFS
QSGQTDDLDYPYGPHPPQSPASRPKKHPKSGKPNQSGSKPDKSDPYGFDKQLDGSSPYDF
NKNPAPTSDESLGSSVGSNPFNNPKRPGRSPYHGSSGQNGYPYPNQTDMPDSDELSGKRV
PRRGDIGIQSLDEKVCQTDDQIVKTLNELINATRKLGRELELSRMETQHLRHLIENCSAC
RTPIVTTPPPSTCDHNSPCYPGVDCRNTPSGPQCGPCLRGYTGNGRVCVKINTITCLQRP
CFQGVRCYDDSNNGYRCDRCPSGYIGDGERCDRMRNPCDRHPCHPEVKCYPTHSPPYFKC
GSCPLGYVGNGTACLDANECELARPCHPGVRCMNLHPGYRCDRCPTGYTGPMTEGVGVEM
ARARKQICQDINECETNNGGCDLYSECINTEGSYRCGACRSGYVGNQTTGCHIQEDVCPD
LITVCDVNAYCIAMYANDFTCKCRVGWAGNGHSCGTDSDSDSIPDRSLHCHDRRCHADNC
PTVPNSGQEDADDDGIGDACDDDADNDGILNLTDNCWLIYNSDQLDSDSDKIGDACDNCP
TNWNPNQEDFDDDGEGDACDNDLDDDGIPNTQDNCINLKNPNQRDSDADGIGDACDNCPG
ISNPDQNDIDGDGVGDVCDTNADRDRDGVQDDKDNCPDVANPGQNDVDRDGMGDECDDDI
DGDGVPNRIDNCPYVYNLDQRDLNRDGIGDACWNDNDNDTVINIHDNCPNNSLVWATDFR
KYFTVALDPYGTAQQDPSWRIHHQGAEIQQLLNSDPGIAIGPDELSNVDFEGTFYIDNND
GDDDFAGFVFSYQDNRHFYVVYWKRDAQVYWESSPFRAEADPGFVLKLVQSDTGPGEMLR
NSLWHKEDTPNQVRVLWKEPGIGWQPRVSYRWHLLHRPKIGLIRFWLYQGTQQIIDSGNV
FDSTLQGGKLGVYCFSQEMITWSDLLYKCTDTVPQTVWDQLPDNLKREIQMEISTKYQQQ
QVIQRRMNYDF
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcccgattttgttgattctcgtactgctggttatctacgctgtcgatggtagc
gtcatacctgacagagctctaactgcaagcctgcaggatgcttggtacgatgatgaattc
attattgcaatatccaacttcaaggataaaaagaaatcttccagcggttcagtggagact
ctgttagctgtgaagtatcggggcgttaaaacgaaattagtgctcttactcgatcgacga
acaaagcgcgttatacttgaaagtctcgatgaggctggtcaacgcagcgcatcacatgtc
aaagtggacagtctcacagtaaatacccctctgaagagtctgattatgctggtacatcag
gcacagcctaatcctcgtgtggatgtgtacgtcgattgtacttacgagggttctataccg
ttcaagacaactttccgcgacatagctgagatcgaggacaacctagacgtggaagtattc
agagaaagaaaatgcagaacaaaagtatatcagtctgcaaccatcactgatgtcctgaga
aaagagcaatgtcctgacaatctacccaagatgaagcagccttcagtattcgatacagat
acaccgaaaacacaacctactgattccgatgaagattatcaaaataagcctaccgatcaa
cctgacgaatcaagtgatgaaattaacggaccgaatttacctggtcagaataataacggt
ctgtcaccttctagtaactcaaagtttccttgggatcataagaaaccttccgataagaag
catcacggtggtcatccgaatgacagcaatcgacctaagaagaaagattcctcgggatat
ccaaaagacaaaaacaaacccaataaatatgatccatacgactcttccgatccgttttct
caatctggtcaaacggacgatcttgactacccgtatggacctcaccctccacagtctcca
gcatctcgccccaaaaaacatcctaaatctggtaaacccaatcaatcaggttcaaaaccc
gataaatcggatccgtacggctttgacaaacaacttgatggatcgagtccatatgatttt
aacaaaaatcctgctccaacatcagacgagtctcttggatcatctgttggatctaatcct
ttcaataatcctaaacgacctggtcgaagtccgtatcacggtagttcgggtcagaatgga
tacccttatccaaatcagacggatatgcctgattcagatgaattatccggcaaaagagta
cccagaagaggcgacatcggaatccaaagtctggatgagaaagtttgccagaccgatgat
caaatcgtgaaaaccttgaacgaattaatcaacgctaccaggaaactcgggagggaattg
gaactaagtaggatggaaacccaacatcttcgtcatttgatcgaaaactgctcggcgtgt
cgtacacccatcgtgacaacaccaccgccgtccacgtgcgaccataactccccgtgctac
cccggcgtcgattgccgtaacacaccgagcggaccccagtgcggcccctgtctacgcggt
tacaccggaaatggacgggtttgcgtcaaaatcaataccatcacctgtcttcaacggcca
tgcttccagggggtacgatgttacgatgacagtaataatggttacaggtgcgacagatgt
ccaagtggatacatcggcgatggcgaaagatgcgacaggatgagaaacccttgcgaccgt
cacccttgtcacccggaagttaaatgttatcccactcacagtccaccgtatttcaaatgc
ggctcatgtccattgggatatgtgggtaatggcacagcctgtctcgatgcaaatgaatgc
gagctggcgcgaccctgtcatcccggagtacggtgtatgaatctccatcctggatacaga
tgtgaccgttgcccgacaggttacacggggccgatgacggaaggtgtcggtgtcgagatg
gccagagcgcgaaaacagatctgccaggacataaacgagtgcgagaccaacaacggcgga
tgcgatctctattcggagtgtattaacacggagggatcctatagatgtggtgcttgcaga
agtggttacgttggcaatcaaacgacaggatgtcatattcaggaagatgtatgcccggat
ttgataacagtctgtgatgtcaatgcctattgcatcgccatgtatgccaacgatttcaca
tgcaaatgtcgtgttggttgggccggaaacggacattcttgcggtaccgatagcgacagc
gacagcattcccgacaggagtcttcattgccatgatcgtcgttgtcacgctgacaattgt
ccaacggtaccgaatagtggccaagaggatgccgacgatgatggcatcggtgacgcatgt
gacgacgacgccgataatgacggcatattgaatctgactgataactgttggctcatttat
aattcagaccagcttgacagcgatagtgacaagatcggtgacgcttgcgataattgtcca
acgaattggaatccgaatcaggaggactttgacgatgacggcgagggtgacgcgtgcgat
aacgacttggatgacgatggtatccccaacactcaagacaactgcatcaacttaaagaat
ccaaatcagcgcgacagcgatgcggatggcatcggtgatgcctgcgacaattgtcctggt
attagcaatcctgaccaaaatgatatcgacggcgatggcgtcggggatgtttgcgacacc
aatgcggatcgcgacagggatggtgttcaggatgataaggacaattgtccggatgtggca
aaccccggacagaacgatgtcgatcgcgacggcatgggcgacgagtgtgacgacgacatc
gatggagatggtgtgcccaatagaatcgataactgtccctacgtctacaatttggatcag
cgtgatcttaatcgcgatggtattggcgatgcatgctggaacgataatgacaacgatacg
gttattaatatccacgacaattgtccaaataacagtttagtatgggcaacggatttccgt
aaatatttcacagtcgctctcgatccgtacggtacagcgcaacaagatccctcatggaga
attcatcatcaaggtgctgaaattcaacagcttcttaacagcgatcccggaatcgcgata
ggaccggacgagctaagtaacgttgacttcgaaggaactttttacatcgataacaacgat
ggcgacgacgatttcgcaggcttcgtcttttcctaccaggataatcgacatttttatgtt
gtttactggaagagagacgcacaggtttactgggaatcatccccattccgcgctgaagca
gatcccgggtttgtattaaagctcgttcagtccgacaccggaccgggagagatgctccgc
aacagtctctggcacaaggaagacacacccaatcaggtgagggtcttgtggaaggaaccg
gggatcggctggcagccaagagtgtcatacagatggcatctattgcacaggcctaagatc
ggcctgatcagattctggctgtatcagggcacacagcagataatcgactccgggaatgtg
ttcgactcgactctgcaaggtggtaaactgggtgtctattgtttctcgcaagagatgatc
acctggtcggatttactgtataagtgcacagataccgtgcctcaaactgtgtgggatcag
ttacctgataatctaaagagagaaattcagatggaaatttctaccaagtatcaacaacag
caagtaatacaacgcagaatgaattacgacttctaa
DBGET
integrated database retrieval system
