Cyphomyrmex costatus: 108780294
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Entry
108780294 CDS
T11118
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108780294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccoa03021
]
108780294
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108780294
Transcription machinery [BR:
ccoa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108780294
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108780294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
zf-CCHC
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
108780294
NCBI-ProteinID:
XP_018403447
UniProt:
A0A195C4C8
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MECIVANVEHMQFDIEVALDEQYGALPLPFTGMDKSIAAVCQFYPRGSCSKGASCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETK
VRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFCPEGPNCKFMHPRFELPAVQDMQPK
EGKKVMITCHFCGEGGHKAIYCNKMPPDVREAQVRQELDNNSHTSHHHMNIHNGPPPPRG
PQKPLEEVTCYKCGQKGHYANKCPKGHLAFLSHAGSGGGAQNQNYRR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtatagtagcgaatgtagaacatatgcaatttgatattgaggttgctcttgat
gaacagtatggagctcttccattacctttcaccggcatggacaaatcaattgccgcagta
tgtcaattttatccgagaggcagttgtagcaaaggagcttcgtgtcctttcaggcatgtt
cgaggcgatcgcacaatagtatgtaaacattggttaagaggtctttgcaaaaagggtgat
cagtgtgaatttttacatgaatacgatatgacaaaaatgccagaatgttatttttattct
agattcaatgcatgtcacaataaagaatgtccatttttacatattgatccggagacaaaa
gtcagagattgtccatggtatgatcgtggtttttgtaggcacggtcccttatgtcggcat
cggcatgtcagacgtgttttatgtatggcttacttagctggtttttgtccagaagggcca
aattgtaaatttatgcatccaagattcgaattaccagcggtacaagatatgcaaccaaag
gaaggcaaaaaagttatgatcacttgtcacttttgtggagaaggaggtcataaagcaatc
tattgcaacaaaatgccacccgatgtacgggaagctcaagttaggcaggagctcgacaac
aattctcatacctcccatcatcatatgaatatacataatggaccaccaccgccacgagga
ccacaaaagccactcgaagaagtgacgtgttacaaatgtggacagaaaggtcattatgcc
aataaatgtccaaaaggtcatttagcttttttgagtcatgcaggcagtggaggtggcgca
cagaatcaaaattatcgaagatga
DBGET
integrated database retrieval system
