Cyphomyrmex costatus: 108780380
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Entry
108780380 CDS
T11118
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 14
KO
K15156
mediator of RNA polymerase II transcription subunit 14
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccoa03021
]
108780380
Transcription machinery [BR:
ccoa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
108780380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med14_C
Med14
RM3_Med14
RM5_Med14
RM8_Med14
RM2_Med14
RM6_Med14
Motif
Other DBs
NCBI-GeneID:
108780380
NCBI-ProteinID:
XP_018403564
LinkDB
All DBs
Position
Unknown
AA seq
1545 aa
AA seq
DB search
MAPVPLEGHQTPVTNNIPQEGNRGGSISLGMLIDFIIQRTYHELTVLAELLPRKTDMERK
IEIYNFSARTRQLYVRLLALVKWANSASKVDKSTHIMAFLDKQSLLFVDTADMLARMARD
TLVHARLPNFHIPAAVEVLTTGTYGRLPACIRERIVPPDPITPTEKRSTLQRLNQVIQHR
LVTGNLLPQMRNLKIEAGRVTFLIDQEFSVSLTVMGDGPTVPWRLLELEILVSDRETGDG
KALVHPLQTRYVHQVVQSRLAESINPLSEVYHILHYFCQSLQLEVLYSQTLRLIRDRLDD
HIHVDEYTPGKCLSISYWRELTRKDPRSELGYRLTVQVDQHDPARPLAVVHIPSLGSKEN
EIAHRAIRSDQLSMECLLVHTIYIRTRSRLSELKQELQTMLKDVECTLAGSPAILSVPIL
QPCLRAELLLVTVDTHTGMLQCHVPQYDAPLVPELTIALNGDHSRLPTLISELRFWITQR
RCEKTLQHLPATSHERLPVLHHPDHPMSKISRHRMFVQLHRHPTVILIVAFKEKESSPCE
IECSFYLAVVKHSSIEDDPHDDSIETEIPKMYLKVQSLIEFDTFVITHGPFTSVDSGNND
QDGGCITEVVETSNNKRRSTGVGGRTDTAGTPQNRRPKHPAYFIPELAHVVALCDERIPF
VTLAQELTRREIAHQGLQVEANATALVLKLVQLPAPSPSIATSSAWHALLKRLLSVSIRV
QGKGMAKTWTVEFVFYGSPLSSSHPKEQGLRRPVYFQYEMGTADIVSRTVDVLLNDWAQI
VHLYLIVHDLAEYFKIEKYNLRNMVSIKSYSYSKLVLAYGPNQGATVTIQWSTNDKAFKM
VFGRSPTNTVTNAHSLMKEQLEAHLNRYTNLAQIIHILNETLQPLTSISKLPSIPQLCVH
ARPRVPVQTFTIMPQCVTLVRIAYQGMYCLELRLRGGGLVSLRDGAYSRFDRSNVVDEFT
PTQGLKAFLSKYVDENAVYRRRSQSEDDNPPSPVTMDSDGAGGNVSFLGHHRSGPQSPAQ
QREGLRFHPPLTPPSGSNPHTPASPHTANISQANQHQSFGSSPATSFNLASPPSLPPNTP
NMLPHPSPGSGLVANSPLNPMHVPSPAGLMPTSSPGPCSNVQVGHSPAGSFMQTGHIDGS
PFPASQSMASPAASNWPGSPSVPRPSPARPGQSPGHAALHSPQASDHKTGSHISRVLPQR
SWAGAVPTLLTHEALEMLCCPSNHPSALPGPDMSPLERFLGCVYMRRQLQRFIQTEDCLT
GINAEPGVVHFKSESLQCRVGLNPTHFQSLHIKVLSLPEYKDQWSVEELQIIEKFFDTRV
AAPPYKHNTLSGFGRMLNVRFKVLKDFVQIMKLDLVPSLVQQQQLKWSVQLCLRIPPSAG
PIVPPGTEGVHVCRSKILFFLQITRLGISYQGETPSLVLPFVHDVNTNITQLADRRDLTP
PPTAIAAASMQLKRFAEYGANQSECSLFPAVRDLLANFTLPSEPPVISQVVSSPAGTQVA
SAQQIQNTAMQMHSPMAAGQGPPQGPGPYGIQGMQPMGMMGGPPQ
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagtacctttagagggtcatcaaactcctgtcacaaataacataccgcaagaa
ggcaatcgtggtggatcaatatccttaggaatgcttatagattttattatacaacgaaca
tatcatgagctcactgttcttgctgaattgctccctcgtaaaacggatatggaacgcaaa
attgaaatttataatttttctgctcgaacaaggcaattgtatgtccgtttattggcacta
gtaaaatgggcgaatagtgcatctaaagtggataaatctacacacataatggcgttttta
gataagcaatcattgctttttgttgataccgcggatatgctggcaaggatggctcgtgat
actttggtacacgctagacttccaaatttccatattcctgcagctgtagaagtacttacc
actggaacatatggtagattaccagcttgtattcgagagagaatagtgcctccagatcct
atcactcctacagaaaagagaagtacgttgcagagattgaatcaagtcattcaacataga
ttagtcactgggaacttgttgccacagatgcgtaatttgaagattgaggcaggaagagtg
acttttcttatcgatcaagagttttcagtatctcttacggttatgggtgatggaccaaca
gttccatggagactgttagaattagaaattttggtctcggatagagagactggagatgga
aaagcattggtacatcctttgcaaactcgatatgtacatcaagttgttcaatcgcgattg
gctgaaagtattaacccattatcagaggtgtatcatatcctacattacttttgtcaatca
ttacaattagaagttttgtattctcaaacgttaagattgattcgtgacagattggacgat
catattcatgtagacgaatacacacctggcaaatgtctttctatatcttattggagggaa
ttaacgagaaaggatccacgatcagaacttggatatagattaaccgttcaagtagatcaa
cacgatcctgcgaggcctctcgcagttgtgcacattccatcattaggcagtaaggaaaac
gagatagcgcacagagccattaggtcggatcaattatcgatggaatgtttactcgtgcac
acgatctatatccgaacccgaagtcgcttgtccgaattgaaacaagagctgcaaacaatg
ctgaaagacgttgagtgtaccttagcgggatctccagctattttatcagtacctatatta
caaccatgtttacgtgctgagctgctgttggttacagttgacactcatactggtatgcta
caatgtcatgtccctcaatatgacgcaccacttgttccggaattaacaatagctttaaat
ggggatcattcacgtcttccgacacttatatctgaattgagattttggataacacagaga
cgttgtgagaaaacattgcaacatctaccagctacctcgcatgaacgtttgcccgttttg
catcatccagatcatcctatgtctaagattagtcggcatcggatgttcgttcaattgcac
cgacatcctacagtcatactgattgtcgcattcaaagagaaagaaagctcaccatgtgaa
atagagtgctctttctatcttgctgtagtgaagcatagttccatcgaagatgatccacac
gatgatagcatagaaacggaaataccgaaaatgtatttgaaagtccaaagccttattgag
tttgatacttttgtgattactcatggtccatttacaagtgtcgatagtgggaataatgat
caagatggggggtgcattacagaagtggtggagacgtctaacaacaaacgtagaagcact
ggggttggaggaaggacagacacggcaggaacaccacagaatagaagaccaaagcatccg
gcttattttattccggaattggcgcacgttgtcgctttatgcgatgaacgaataccgttc
gtaactctggctcaagaacttactagacgggagatagcccatcagggactccaagtcgag
gctaacgctacggcattggtactcaaacttgttcaattgcctgcaccatcaccgagtata
gctacgagcagtgcttggcacgctcttctcaaaagacttttgagtgtctcgattagagtt
cagggtaaaggaatggctaaaacttggacggtggaatttgtattttatggtagtcctctc
tctagtagtcatcccaaagaacaaggtttgcgtaggccagtctactttcaatatgaaatg
ggtacagccgatatcgtctctcgcactgtagatgttttgctaaacgattgggcacagata
gtgcatttgtatttgatagttcatgacttagctgaatatttcaaaatagaaaaatataac
ttacgcaacatggttagcattaagtcttatagttatagcaagctagttcttgcgtatggt
ccaaatcaaggtgcaactgtcactatacagtggagtacgaacgacaaagcatttaagatg
gtatttggtaggagtccaacaaatacggtgaccaatgcgcattctctaatgaaggaacaa
ctagaagctcatttgaatagatacacgaatttggcacaaattattcatatacttaatgaa
acgcttcagccactcacttcgattagtaaattaccatcaatccctcagttatgcgtgcat
gcgagaccacgagtgccggtacaaacgtttactataatgccacaatgtgtcactttagta
aggatagcgtatcaaggaatgtattgtttggaattgcgtttgcgcggcggtggtttggtg
agcttacgcgacggtgcttatagtcgttttgacagaagtaacgtcgtcgatgagtttact
cctacgcagggtctaaaagcatttttgtcaaaatatgtcgacgagaacgcagtatataga
agaaggtctcagtcggaggatgataatccaccgtcgcctgttactatggacagtgatggt
gctggaggcaatgtaagcttcttaggtcatcatagaagtgggcctcaatcgcccgctcag
cagcgcgaaggtctgagatttcatccaccgctcacacctccatctggtagtaatcctcac
actccagccagtcctcatacggcaaatatatcccaggcaaatcaacatcaaagtttcggg
agcagtcctgcaacttcatttaatttagcttctccgccgtcgttgccgccaaatacacct
aatatgttaccacatccgtctcctggatccggactcgttgcaaacagtcctttaaatccg
atgcacgttcctagtccggctggtcttatgccaacatcatcgcctggtccttgcagtaat
gttcaagtagggcattctcctgctggttcatttatgcaaacaggtcatatcgatggtagt
ccttttccagcttctcaaagtatggcttccccggctgcctctaactggcctggatctccc
agtgtaccgagaccttctcccgcgagacctggacaaagcccgggtcacgcagcgctgcat
agcccacaagcctctgatcataagaccggtagtcacatctccagggttttaccacagagg
tcctgggcaggtgccgtgccaactcttctcacgcacgaggctctagaaatgctttgctgc
ccatcgaatcatccgtctgccttaccgggtccagatatgtcgccgcttgaaagatttcta
ggctgcgtctatatgcggagacagttacaacgctttatccaaacggaagattgcttaact
ggtatcaatgcagagcccggtgtggtacatttcaaatctgagagcttgcaatgcagagtt
ggattaaatcctacacattttcaatctcttcacatcaaggttctttcacttccagagtat
aaagatcaatggagcgtagaagagttacagattatcgagaagttcttcgatacgcgggta
gccgccccgccttacaaacacaatacactgtccggtttcggtagaatgcttaacgtacgt
ttcaaagtgttaaaggatttcgtgcaaataatgaagctggatctagtccctagtcttgta
cagcagcagcagctgaagtggtccgtgcagttgtgtttgcgtattccaccttccgcgggg
ccaatcgtgcctcctggtacggagggagtacacgtttgcaggagtaaaattctatttttc
ttgcaaataacaagactaggtatatcatatcaaggagagacaccgtccttggtgttgccg
tttgtgcatgatgtcaatacgaatataacgcagctagcggacagaagagatcttactcca
cctcccacggcgattgcggcagcgtctatgcagctgaagagattcgccgagtacggcgcg
aatcagtcagagtgctcgctgttccccgctgtacgcgatcttttagctaatttcacatta
ccgtctgaaccaccggttatatcacaggttgtgtcgtccccggcgggaactcaagtagct
tccgcacagcaaattcagaacacagcgatgcaaatgcattcgcccatggctgctggtcaa
ggtccaccacagggaccaggaccatatggaatccaaggcatgcaaccaatgggcatgatg
ggcggcccgcctcaatag
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integrated database retrieval system
