Cyphomyrmex costatus: 108780421
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Entry
108780421 CDS
T11118
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04140
Autophagy - animal
ccoa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108780421
04148 Efferocytosis
108780421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108780421
Membrane trafficking [BR:
ccoa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108780421
Hops complex
108780421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
PipB2_N
YlzJ
Motif
Other DBs
NCBI-GeneID:
108780421
NCBI-ProteinID:
XP_018403625
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MSAMLTADWFPLGRDVYFRKFELYPISFQHEISSNNLIVAAPYGGSIAVTRNPKKLVKIQ
GASKPLILLYTSSGKLTAKLQWSSGQLISFGWSQQEELLCVQDDGMVLIYDMFGTYQHTF
SMGNVAKDTKVVDAKFFTTSNSTGIAVLTSTNRIFLVNNVSEPKVRPITDVPRYPIDCWY
MVHCERETQAILSNREGIFVIHQSHQNTFSFSSLFNNKINSVIAIAASSNNRHIALYSDT
GHLYIGSIDFREKYCECYTNVKESLTNIAWCGTEAVVCSWHSTIMVVGRMADTIVYNYDG
SIHLVTEIDGVRVLSNSSHEMIQKVPNVVQRIFRINSTDPASYLLEASKQFQKKSHKADS
YIDLVKDKLDSAIKACIDGASHEFDFETQKILMRAAKFGKGFSKTIDSEYYVQMCRILRV
LNAVRHPVVGIPLTYAQFNILTNQVLLDRLVARRHYYLSIQIARHLQLPEIDGESRILAH
WACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIAKRAADCGRKQLAIKLIDYEPRAHQ
QVPLLLTLGEERAALHKAVESGNTDLVYTVILHLRENMTLGDFQMSIMHCPLAMALYIKY
CQNHNRETLRDIYNQYDDFHSQAVWFITESYQRKNTMSRDALLQSAQENFRSARNDTNAS
LTEEQIKLLKYQRSLEDTLHESVVGKPLHDTMRILLLRNELKLADKLRSEYKIPDRRYWW
LRIQCLAEQGLWNDLEKFSKSKKSPIGYEPFIDECLKYNEKLEARKYLTKVKDDLKVKYL
VKLNLLSEAAQTAYEQKDASALTFVLAQCGSSDRQFVDKINMLLASLKN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgatgttaactgccgattggtttcctctgggacgagacgtatactttcgcaaa
tttgagctgtatccgatatccttccaacatgagatttccagcaacaacttgattgttgca
gctccatatggaggctccattgctgtaacgagaaaccccaagaaacttgtcaagattcaa
ggggctagcaaacctttaatattgctgtatacatcatcagggaaattgacagccaaattg
caatggagcagtggccaactgatatcgtttggctggtctcagcaagaagaattgttgtgc
gtgcaagatgatggtatggttctcatatatgacatgtttggaacttatcagcataccttt
agcatgggaaatgtagccaaggataccaaagttgtcgacgcaaagtttttcacaacatct
aatagcactgggatagctgttttaacgtccaccaatcgtatatttctagtaaacaacgtg
tctgagcctaaagtccgaccaattactgatgtaccaagatatccaattgattgctggtac
atggtacattgcgaaagggagacacaagcgattttgtcaaatagagaaggaatatttgta
attcatcagtctcatcagaacactttttcatttagcagtctattcaacaataagatcaat
agtgtgatagcgatagctgcgtccagcaacaatcgccatattgcgctttattccgatact
ggacacttgtatatcggttcaatagatttcagagagaaatattgtgaatgctatacaaat
gtgaaggaatctctaacgaatatagcttggtgtggtacagaagccgtggtatgcagctgg
cacagtacgataatggtagtaggacgtatggctgatactatagtatacaattatgatggt
tcaatacatttagttacggaaatcgacggagtacgcgtgttatcgaacagttcccatgaa
atgattcagaaagtaccaaatgtcgtgcaaagaatatttagaatcaactcgacggatcct
gcatcctatctcttagaagcctctaaacagtttcaaaagaagagtcacaaagctgatagt
tatatagacttggtgaaagataaactggattcggcaataaaggcatgcatcgatggtgcg
agtcatgaattcgatttcgaaacacaaaaaattctgatgagggctgccaaatttggaaaa
ggatttagcaaaacgatagattcggagtattatgttcaaatgtgtaggattttgagagtc
ttgaatgcagtgaggcatcctgttgtgggcattccgttaacgtatgcgcaatttaatatt
ctcacgaatcaagtgttgctagaccgactagtagcacgaagacattattatttgagcata
caaatagcgcgtcacttgcagttacccgagatagatggggaaagtagaatattagcacat
tgggcttgttacaaagtgaaacaaacgcagttagataaggaacaaatagcagaggaaatt
gctgataaattaggatacgcacctggtgtttcgtatagcgaaattgcaaaaagagcagcg
gattgcggacgaaaacaattggcgattaaattaatcgattatgaaccacgagcgcatcaa
caagtacctttattattgacacttggcgaggaacgtgctgccctgcataaagccgtagaa
agcggtaatacggatctagtctatactgtcattcttcatctcagagaaaatatgacactt
ggcgactttcaaatgtctataatgcattgtcctctagcaatggcattatatatcaaatat
tgtcagaaccacaatagagagacattgcgtgatatttataatcaatacgacgattttcat
tcgcaagcagtgtggtttatcactgagagttaccaacgaaaaaatacaatgtcgagagac
gcattactgcaatcggctcaagaaaattttagatcggctcgtaatgatactaacgcgtcg
ttaacagaagaacagataaaactcttgaaatatcagagatctttagaggatacgctacac
gaatcagtcgtgggaaagcctttgcatgataccatgagaatattattattgcgtaatgag
ttaaaattggcggacaagttacgatcggagtataaaataccagatcggagatattggtgg
ctaagaatacaatgtttagcagaacaaggtttatggaatgatttggaaaagttttctaaa
agtaaaaagtctcctattggctatgagccgtttatagatgaatgcctaaagtacaacgaa
aaattagaagcgagaaaatatttaaccaaagttaaagatgatctcaaagtcaagtattta
gtgaagttaaatttgcttagcgaagcagcacaaacagcgtatgaacaaaaagatgcttcg
gctctcacatttgtgctggcacaatgcggatcatcagacagacaattcgtagataaaatc
aatatgttactagctagtcttaaaaattaa
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integrated database retrieval system
