KEGG   Cyphomyrmex costatus: 108780590
Entry
108780590         CDS       T11118                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108780590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccoa03041]
    108780590
   04121 Ubiquitin system [BR:ccoa04121]
    108780590
Spliceosome [BR:ccoa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    108780590
Ubiquitin system [BR:ccoa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108780590
SSDB
Motif
Pfam: SART-1 HIND DUF4410
Other DBs
NCBI-GeneID: 108780590
NCBI-ProteinID: XP_018403851
LinkDB
Position
Unknown
AA seq 746 aa
MGSNKRHKTEKSRDTKKKRHRSRSRSYTPEREKSEKHRHHKKHRRKERKDYDSDVEIVNA
PPPPKISKSSHPSTPPPPEISKQRSPSPVKGGASQTSLSIEETNKIRAKLGLKPLEVDNI
SKDDPNKIKDDLGEFYHKPAPNNSDKIKAQKLREKIGTQKEKRQIEANLSKVKNLGEVDS
DDDTQVWINKSRQLEEEKKKAEMRAKMLDQLDEEFGIGNLVKEEIHTARNTAYTQKDLKG
LKVEHDIETFEEGKTVILTLKDQEVLNEADDLLVNVNMIDNERYKRSVLNKKKKPVYDPY
ADENFDEYGFSKNKILEKYDEEIDGEKKDNFVLGVNNAVEIKRRQIETVKQRLANKKLET
LQMTEPKLASEYYNEEELAKFKKPKKKIRKIRTKKKLKADDLVPVDNDYLRDLGSRRRKK
PEDSKDNDILDVDDLEAPAEDLTGIKLEEDDKELELQMALKKTQRLKEGHSTGIQKTVET
IKQEILNSEESQSGNIVLNSTAEFCRTLGDIPTYGLAGNREENGQELMDFEIDGIKEEPP
ANEEEDNGRGAWNTVHLDENISEPVVMEAAILDAEPSLGHGVGGALKLAMSKGYLQKEDS
NRPSASRFAHLQAQNYSIEDKTYGDDDKFGRRDRFNGPTSDFKEKEGFKPNVKLEYIDDD
GHVLCAKEAFRYLSHKFHGKGPGKNKVEKRMKKAEQEVLMKRMSSTDTPLGTLNLLQAKQ
KETQSPYIVLSGSKQMQTTSIAKTKH
NT seq 2241 nt   +upstreamnt  +downstreamnt
atgggctccaacaaacgtcataaaaccgaaaagtctcgtgataccaaaaagaagcgtcat
cgcagtcgctctagaagctacacacccgaacgcgaaaagtcggagaaacacaggcaccat
aagaagcacagaaggaaagagcgtaaagactacgacagcgatgttgaaatcgttaatgct
ccgccgccaccaaaaatatccaaatcatcacatccatcgacacctcctccacctgaaatc
tcaaaacagcgtagtccatcccctgttaaaggtggagcatcgcaaacctcattatctatt
gaagaaaccaacaagattcgtgcaaaattgggattaaaaccattggaagtagataatata
tctaaagatgatcctaacaaaattaaagatgatctgggcgagttttatcataaacctgca
ccaaacaatagtgataaaataaaagcgcagaagctgagagaaaagataggtactcagaaa
gaaaagagacaaattgaggcaaatttgtcaaaagtgaagaatttgggtgaagttgattcg
gatgatgatactcaagtatggatcaacaaatctaggcagctagaggaagagaaaaagaaa
gcagaaatgagagctaaaatgctggatcaattagatgaagaattcggaatcggtaatttg
gttaaagaggaaatacatactgcccgcaacacggcatatacacagaaagatttaaaaggc
cttaaagtcgaacatgatattgaaacatttgaagaaggcaagactgtaatcctaacgtta
aaagatcaagaagtattaaatgaagctgatgatttacttgtaaatgtgaatatgattgat
aatgaacgttacaaacgtagtgttttgaataaaaaaaagaaacctgtgtatgatccatat
gctgatgaaaatttcgacgaatatggattctctaaaaataagattttagaaaagtatgat
gaagaaattgatggtgagaagaaagataattttgtgttgggtgttaataatgcggtagaa
attaaacgacgccagatagagacagtgaagcaacgcttggcaaataaaaaattagaaacg
ctacaaatgacagaaccaaaattagcgagtgaatattacaatgaagaggaacttgcaaaa
ttcaagaaaccaaagaagaagattcggaaaattagaacgaaaaagaaactgaaagcagac
gatttagtccctgtggacaatgattatcttagagatcttggaagtaggagaagaaaaaaa
ccggaagattcgaaagataatgatattttagatgtcgatgatttagaagctcctgcagaa
gatcttactgggataaaacttgaagaagacgataaggaattagaattacaaatggcttta
aagaaaactcagcgtttaaaagagggacattcaaccggcatccagaaaactgttgaaaca
ataaaacaagaaattcttaattctgaggaaagtcaatctggaaatattgttcttaattct
actgcagaattttgtaggactttgggtgatatacctacttatggactcgctggaaataga
gaggaaaatggacaggaactaatggattttgaaatagacggcattaaggaggaaccacct
gcaaacgaagaagaggacaatggtcgtggtgcttggaatacagtgcatttagatgagaac
atttcggaaccagttgtaatggaggcagcaattctagacgctgagccgtcactcggccat
ggggtaggtggagctttaaaattagctatgagtaaaggttacttgcagaaagaagacagc
aatcgcccttcagcgtcacggttcgcacatctgcaagctcagaattattcaatagaggac
aaaacatatggggatgacgataagttcggcagaagagatcgctttaatggaccgacatct
gattttaaggagaaagaaggcttcaagccgaatgttaagcttgaatatatcgatgatgat
gggcatgtcttgtgcgctaaggaagcttttcgatatctgtcacataaatttcatggaaaa
ggtccaggaaaaaataaggtggagaaaagaatgaagaaagcggaacaagaagttttaatg
aaacgaatgtcttcaacagatacacctttaggtacattaaatttattgcaagcgaaacaa
aaggaaacacaatcaccatatatagtgctcagcggcagtaaacagatgcaaacgactagc
atagctaaaacaaaacattaa

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