Cyphomyrmex costatus: 108780638
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Entry
108780638 CDS
T11118
Name
(RefSeq) probable elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoa03016
]
108780638
Enzymes [BR:
ccoa01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
108780638
Transfer RNA biogenesis [BR:
ccoa03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108780638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
FR47
Ribosomal_L9_N
Motif
Other DBs
NCBI-GeneID:
108780638
NCBI-ProteinID:
XP_018403910
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MVIPKFKNQSKEERMVITIGEIIQELLKAHNENRNIDLNKLKTRISSKYGLDSSPRLVDI
IAAVPSYARNILVPKLKAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDF
EYSTQSYTGYEPTSMRAIRARYNPFLQTRHRVEQLKQLGHNVDKIEFIVMGGTFMSLPDD
YRDYFIRSLHDALSGHVSNNVDEAVSYSERSTTKCIGITIETRPDYCLKKHLSDMLRYGC
TRLEIGVQSIYEDVARDTNRGHTVRAVCESFQLAKDAGFKVIAHMMPDLPNVDLERDIAQ
FKEFFKDPAFRADGLKIYPTLVIRGTGLYELWKTGRYKSYAPSVLIDLIARILALIPPWT
RVYRVQRDIPMPLVTSGVEHGNLRELALERMKDMGTDCRDVRTREVGIQEIHHKVQPYEV
ELIRRDYVANGGWETFLSYEDPLQDILIGLLRLRKCSTNTFRSELKEKTSIVRELHVYGS
VVPVSARDPTKFQHQGFGILLMEEAERIAKEEHQSHKISVISGVGTRNYYRKLGYELDGP
YMSKMLI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggtgatacctaaatttaaaaatcaaagcaaggaggaacgtatggtaataacaattgga
gagataatacaggagttattaaaggcacacaatgaaaatcgaaacattgatctaaataaa
ttaaagacacgaatttcttcaaaatatggcttggattcttccccaagattggttgatatt
attgcagcagtgcctagttatgctagaaatatacttgtaccaaaattgaaggctaaacct
atcaggactgctagtgggattgcagttgtagcagtaatgtgcaaaccacatcgatgtccg
cacattaatatgacaggaaatatttgtgtttattgccctggtggtccagattctgatttt
gaatattcaactcaatcttacacaggatatgaacctacatcaatgagagctatacgagca
agatataatcctttcttacaaactagacatcgtgttgaacagttgaagcagttgggtcat
aatgttgacaagatcgaatttattgttatgggtggtactttcatgtctttgccagatgac
tatagagattattttatacgaagtttacatgatgcgctctcaggtcatgtaagcaataat
gttgacgaagcagtgagttattcggaacgtagtactacaaaatgtatcggcatcactatt
gaaactcgaccagattattgtctcaaaaagcatctctcggatatgttacgttatggatgc
acacgtttagaaattggtgtacaatcgatatatgaagatgtagcacgtgatactaataga
gggcatacagtacgcgctgtatgtgaaagttttcaactagcaaaagatgctggattcaag
gtgatagctcacatgatgccagatttaccaaatgtcgatttggaacgagatatcgctcag
tttaaagaattcttcaaagatcctgcatttcgagcggatggattaaaaatttatccaaca
ttggttatacgtggcaccggcttgtatgaattatggaaaactggcagatataaaagctat
gctccaagtgtattaatcgatcttatagctcgtattctagcattgatacctccttggact
cgcgtttatcgcgtacaacgtgatatacctatgccattagtaacttctggtgtagaacat
gggaatctacgtgaattagctctagagagaatgaaggatatgggcacagactgccgtgat
gttagaacgcgtgaagtagggattcaagaaatacatcataaagtgcaaccttacgaagta
gagcttatacgacgtgattacgtagcaaacggcggatgggagacatttctgtcatacgaa
gatcccttacaagatattctaattggcctactcagattaaggaaatgttcgaccaacaca
ttcagatcggaattaaaagaaaaaacttctatagttagagagcttcacgtttatggcagt
gtagtacctgttagtgctcgcgatcctacaaagtttcaacaccaaggcttcggcattttg
ttaatggaagaagctgaacgaatcgcaaaagaggaacatcaatctcataaaatttctgta
atttcaggcgttggtacacggaattattatagaaaattaggttacgaacttgatggtcca
tacatgtctaaaatgcttatataa
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