Cyphomyrmex costatus: 108780640
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Entry
108780640 CDS
T11118
Name
(RefSeq) homeobox protein SIX2-like
KO
K15614
homeobox protein SIX1
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoa03000
]
108780640
Transcription factors [BR:
ccoa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108780640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
VPS13_N
Motif
Other DBs
NCBI-GeneID:
108780640
NCBI-ProteinID:
XP_018403915
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MMAYGGTAGNGGAMGPTSGGSGGGGADVLGTTAGDYSPQSTPNPTPLTGHSTTGSTVENA
YTPGVTGAASYSPQDSPASSAGGSGNGQLPSFGFTQEQVACVCEAMVSNVQVLQQAGSVE
RLSRFLWSLPACTRLHRHESVLKAKAIVAFHRGQFKELYRILESHTFNPNNHPKLQNLWL
KAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLREWYANNPY
PSPREKRDLAESTGLTTTQVSNWFKNRRQRDRAAEHSGQREDKTHGGGLGDSSSESGDET
KRQSSQQQQQQQPSSCAIQQQQQQQQQQQQMVDHQQTSSMYQLPPPASVSVSSPHSYHQG
HSSTLSHPHMQHHDTSSESGDDKRNLHHQLQHHLQVGTHGAHGLVHPAATLPPPPPSCAQ
QKSQLDYMQYYPQDYLIGTPTSADLQKSLPHTATSMQMGAIAPSMGGLSPMGPSSMLSNT
MQSVNTMNTMSMNGMGMGAYQGMGSMGMSTSHTSYHSGLVLGEYHSL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgatggcctacgggggcaccgctggtaacgggggcgcgatgggcccgacgtccggcggc
agcggcggcggtggtgcggatgtcctgggtaccactgccggcgactacagccctcagagc
acgcccaatcccacacccctgaccggacactcgaccacgggtagcacggtggagaacgct
tacacgcccggcgtaaccggagcggccagctacagcccccaggatagcccggcgagctcc
gccgggggcagcggtaacggccagctgccgagttttggtttcacgcaggagcaagtggcg
tgtgtctgcgaggcgatggtgtcgaatgtccaggttctccagcaggcaggctccgtggag
aggctcagccgatttctatggtctctgccggcgtgcaccagattgcaccggcatgagagc
gtcctcaaagccaaggcgatcgttgcctttcatcggggccaattcaaggagctctacagg
atcctggagagccacaccttcaacccgaacaatcatccgaagttgcagaatctctggctc
aaggcccactacatcgaagccgagaggttgcgcggcaggcccctcggcgcagttggcaag
taccgggtgcgccgtaagtttccgctaccgcgcaccatctgggacggcgaagagacgtct
tactgcttcaaagagaagtccaggagcgtcctgagggaatggtacgccaacaatccgtat
ccgtcgccgcgcgaaaagcgagatttggcggagagcaccggccttaccaccacgcaagtc
agtaattggttcaaaaataggagacagagagatcgcgctgccgagcatagtggccagagg
gaggataaaactcacggcggaggtctcggggactctagcagcgagagcggcgacgaaaca
aagcgacagtccagccagcagcaacagcaacaacaaccgtcttcctgtgcgattcaacag
caacagcagcagcagcagcagcagcaacaaatggtggaccatcagcaaacctctagcatg
taccaacttccgccaccagcttccgtctcagtttccagcccgcattcgtaccaccaaggc
cacagttcgaccttgagccatccgcacatgcagcaccacgacacgagttccgaaagcggt
gacgacaagaggaaccttcatcatcagttgcagcatcatctccaggtgggcacccatggc
gctcatggtttagtccatcctgccgccaccttgcccccaccaccgcctagctgcgctcaa
cagaaaagtcagctagattacatgcaatactatccacaggactatctaatcggcacgcca
acctccgcggatctgcagaagtccttgccgcacacggcaacgtcgatgcagatgggtgcg
attgccccttctatgggcgggttgagcccgatgggcccctcgtcgatgctgtccaacacc
atgcaaagcgtcaacaccatgaataccatgtcgatgaacggcatgggcatgggcgcttac
caaggcatgggttccatgggaatgtcgacgtcgcatacgagttaccacagcggcctcgtg
ctgggtgaataccattcgttgtga
DBGET
integrated database retrieval system