Cyphomyrmex costatus: 108780670
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Entry
108780670 CDS
T11118
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
ccoa
Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108780670
Membrane trafficking [BR:
ccoa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108780670
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108780670
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108780670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
TBC1D_hel
PID
PTB
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
108780670
NCBI-ProteinID:
XP_018403963
UniProt:
A0A195C350
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MITVPISASSPYRSYSDASKVAKEPLVRAAEDHPLPNAQICKESLKDMKEHSAAQRMERD
KDLPQRSQSSAASLISIGADISPSSSQFFEVFYIGKIKVSNPKVPESFIDDALIKFRVHG
LEKSRSSTSNLLSDCQRLKRQALMSSINRRNSTESTASESGSIENVSGNSIIPSVNPLGI
PPVLSSSVETFPRTITNPVENDGNRMSESSATSNIIVPEIMRNRAASTGSVLSGRRDSTI
KGNDDHNRTMVFQVGRFDLRLISPDRKQILLHKQLKDVASCAQGIKNPEHFGFICKESEY
FIGYVFKCQSGSVADDLVAAISQAFLTTCDVARKERYPVFSCEHCPMYWYNKLCQEIDGQ
NDRRVQNIIFSRMELLPEDEQEIVVSKYKGAEAAGNIGVSSSNLREQNQFLMRLLRAHCE
SKQARHVHDTAENRSEFLNQYLSVGVGSTIFMKAKRSLTNSFDNLMKRKGSRDDFGLGPQ
LRDTNHLSTGTQKYGSPSPDNSRQSSILDISPESSRPRSLRVSPEQQIVNNGPKSSMMDI
FLKVGNSPKTSPTENDGNNTIQANSSWRQTILNRVVTPNKDHNATEIEKINILKNLEIPG
KRRSKQELRDLWKKAINQQLILIRMEKENAKLRERQEEATVKRIKLEYDELSSCAREVME
VWDLLVSKESRVSTKCDNQMLLHAIKQGVPKGKRGEVWQFLAEQFCLKQPPIDTQEFPNY
NTPYELLLKQLTSQQHAILIDLGRTFPSHPYFSSPLGPGQLALFNLLKAYSLLDHEVGYC
QGLSFVAGVLLLHMAEDQAFFLLRHLMFRRGLRKLYLPDMAALQLHLYQLSRLLHDRLPT
IYNHFDKHEVSPTLYAAPWLLTLFSSQFPLGFVTRVFDLLFLESSEVLFRVSVALLEEHQ
DQLLCCDSFEEIMEYLKIRVPAIDKQSLDRIMKRVFYPDLEITKQLNEYRVEYQVLQEEM
ISVKPQMENLEKFKLRNKQLTQEVAQLNEQLEITMSNLHRLETARSMQQATIHRLESQNR
SLEVTVATLGAFIQQLADTRADIEVPGEVRRIIAQLSMVEKRRNAGTKSYPLKVIEDNKH
GMIKSNSTGRESQNLLRNNSIDTPYPLKSTLSQPNLATKLEKVSSFFSNSHNHIQKQRAQ
LAALRNEYSERIRNNDENDPKTVNIDIQITDTMNLANNPVPQNENNLKVPATNLEKSISL
PLKLKLKSSKSAYELSSVRKVPTSKLEVTSNDSLTNLTGTIHPLDTCSDVNFRYSGTTKL
KSIKPVKSSQSCQEDSSNKQKPEQISDPLNR
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgataacggtaccgatatcagcctccagtccctacagatcttacagcgacgccagtaag
gtcgctaaggagcccttggtcagggcagcggaagatcatcctttgccgaatgcacaaatt
tgtaaagagtccttgaaagacatgaaggaacattcggcagcacaacgaatggagagagat
aaggacttgccacagcggtcgcagagcagcgcggctagcttaatttctataggtgccgat
atatccccaagttcttcccaattctttgaagtattctatattggcaaaattaaagtatcg
aatcctaaagtaccagaatcatttattgatgacgccttgataaaatttcgcgttcatgga
cttgaaaaatccagatcttcaacaagtaatcttctgtcagattgccagcgattgaaacgt
caagctttgatgtcttccattaataggagaaacagtacggaatctaccgctagtgaatca
ggcagtattgagaacgtgtcgggaaatagtataattccaagcgtgaatccgcttggaata
ccgccagttttaagcagctccgtggagacttttccaagaacaattaccaaccccgtagaa
aatgatggaaatcgaatgtctgaatcttccgctacttctaatatcattgtacctgaaatt
atgcgaaatcgcgcagcatctactggcagtgttttaagcggcagaagagattctactatt
aaaggaaacgatgatcacaatcgcactatggtttttcaggtaggacgatttgatctgaga
ttgattagccctgatagaaaacagattcttctgcacaaacaattaaaagatgtagccagt
tgcgcgcaaggcataaaaaaccccgagcactttggatttatttgcaaagaatcagaatat
ttcatcgggtatgtctttaaatgccaatccggatcagtcgccgatgaccttgttgcagca
attagtcaagctttccttacgacttgcgatgttgcgagaaaagaaagatatcctgtattt
tcttgcgaacactgtcctatgtattggtataataaattatgtcaagaaattgacggacaa
aatgatagaagagttcaaaatattattttttctcgtatggaattattaccggaggatgag
caggaaattgttgtgagcaagtacaaaggcgctgaggctgcgggcaatattggagtaagc
tcttcaaatttacgagagcaaaatcaattcttaatgcgactattgcgtgctcattgcgag
tcgaaacaagctagacatgtacatgacacggctgaaaataggagtgaatttcttaatcaa
tatctaagcgttggtgttggtagtacgatatttatgaaagcaaaacgctctcttacaaat
agctttgataatctcatgaaaagaaaaggttcacgtgatgattttggtttgggcccgcaa
ctgagagacacgaatcatctaagtacgggaacacaaaagtatggtagtccaagtccagat
aattcacgacaatcatctatattggatatttcgccggaatctagtagaccaagatcattg
cgtgtttcgcctgaacagcaaattgtaaataatggaccaaaaagttccatgatggatatc
tttttaaaagttggtaattcacctaaaacatcccccacggagaacgacgggaataacaca
atacaagccaatagttcgtggcggcaaacaatactaaacagagttgtgacaccgaataaa
gatcataacgctacagaaattgaaaaaatcaatatcctcaaaaatttggaaatacccggt
aaacgtagatcgaaacaagaattaagagatttgtggaagaaagcgatcaatcagcaatta
atacttataaggatggaaaaagaaaacgcaaagcttagagaacgtcaagaggaggcaacg
gtaaaaaggattaaactcgaatacgatgagcttagtagctgcgcgcgtgaagtaatggaa
gtttgggaccttcttgttagcaaagaatcgcgagtctctactaaatgtgataatcaaatg
cttttacatgctattaagcaaggtgtaccaaaaggaaaaagaggtgaagtgtggcagttt
ctagctgagcaattctgcttgaaacaaccacctatagatactcaagagtttccaaattat
aacacaccgtatgaacttctcctgaaacaactcacatctcaacaacatgctattcttatt
gatttgggaagaactttcccaagccatccctattttagttcacccttgggacctggtcaa
ttagcactctttaatttactgaaggcctactccttactagatcatgaagttggttattgt
caaggcctcagttttgtcgccggagtccttctattgcatatggcagaggatcaagccttt
ttcttattacggcatctaatgtttcgtcgaggacttagaaaattatacttgccagatatg
gcagcattgcagttacacttatatcaactctctagactgttacacgatcgcttgccaact
atttacaatcatttcgataaacatgaagtttcaccaactttatatgccgctccgtggtta
ttgacgctgttttctagccaatttcctttaggttttgtaaccagagtttttgatttactt
tttttggaaagctccgaagttcttttccgtgtatcggtcgcattattagaagaacatcaa
gatcaattgctatgttgtgatagctttgaagaaattatggaatatctcaagatacgtgtg
ccagcaatagacaaacaaagtttagatcgcataatgaaacgtgtattttatcctgacttg
gaaatcacaaaacagttgaacgaatacagagtggaataccaagtacttcaagaggaaatg
atatcggtgaagccacaaatggagaatttggagaaattcaaattaagaaataaacaactc
acgcaagaagttgcacagcttaacgagcaacttgagattactatgagcaacttgcatagg
ctcgagacggcgcgttcaatgcaacaagctactatccatagacttgagtctcaaaatcgc
agccttgaagtaacagtagctacattgggcgcgttcattcagcaattagcagatacacgt
gccgatattgaagtcccgggagaagttcgtagaataatcgcacaattaagtatggtcgaa
aaacgacgaaatgctggtaccaaatcatatcctttgaaagtcatcgaagacaacaagcat
ggaatgataaaaagtaattcaactggaagagagtctcaaaatcttttaaggaataatagc
atagatacaccgtacccattgaagtcgactttgagccaacccaacttagcaacgaaatta
gagaaagtctcttcgtttttttcgaattcgcacaatcacatacaaaagcaacgcgcgcaa
ttagcagctctcagaaatgaatattctgaacgaataagaaacaacgacgagaatgatcct
aagacggttaacatcgacattcaaattacggatactatgaatttggcaaataatccggtt
ccacaaaacgaaaacaatttaaaagttccagctaccaatttagagaaatcgatatcgtta
ccactgaaactcaagttgaaatcatcaaagtcagcatacgaattgagttctgtaagaaaa
gttcccactagtaaactcgaagttacgagtaatgattcattaacaaatttgacaggaacg
atacacccactcgatacttgtagcgatgtgaatttccgatatagtggaaccacgaaatta
aaatctatcaaacctgtaaaatctagtcagagttgtcaagaagatagtagtaataaacaa
aagccagaacaaatctccgatcctttaaatagataa
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integrated database retrieval system
