Cyphomyrmex costatus: 108780836
Help
Entry
108780836 CDS
T11118
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccoa04121
]
108780836
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108780836
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccoa03037
]
108780836
Enzymes [BR:
ccoa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108780836
Ubiquitin system [BR:
ccoa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108780836
UBL E3 ligases
108780836
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108780836
Cilium and associated proteins [BR:
ccoa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108780836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PWI_Topors
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-ANAPC11
zf-rbx1
PH_3
Proho_convert
Motif
Other DBs
NCBI-GeneID:
108780836
NCBI-ProteinID:
XP_018404155
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MYSPLSPQASLSSELRQIINERNMLSMRSRMKVLQALNEDNEKCTEEKEKILRSQAIREI
LTTEVTYLQQLEILAEFFIQPILERKLLDHPLLVTLAKNIKTLYNVSGELVAGLKHNPDN
IAGVFYKLAPFFKLYSIYAYDYTQVLNLLQISEENDSVFKKFICDQETRPEVGRKLSSLL
ITPVQRVPRYQLLVKQVLQHTPYRHREYRYLQACLVEIEKSAKHINTLIAQNEETQKLLN
LQKCIVTSINLVKPGRMLIKQGSLMRVSRRGNSAYRRYFVLLNDTLLYCKGEPETSLNVS
CVLPLNKCSLTCVLSKKLFRITCLHETFLLYSEKADSAEWIQSIQSAIKKYTECRQTLRK
ESSSRKPLRHKNINEFDEFESDGISKKSIKRKRCIKDEQISLDTSSIIYFKKDNEMDEDI
QNSNTICLSFSTKRFKQNEYSKPGHTSPQVKNTKLKLCKNKNKKRPISTHRYLKKSSHCN
YNETLPMTTTINGPSLCSIISNDEEHTSPFQMMSDFFKFIGTTIKDFIAMEGPLEIKNPS
ADVEEPIKSEILVQNSDNNERNDATSPPPNCSICLGKLVNTSFTDSCLHQFCFTCLLQWS
KIKTECPLCKQTFKSIIHNVRSEEDYDQYHVPRELASQIPQSQVNASLDVNFDVDWAAAP
RRFVYRTTMTGNRRHGVLLNPEQVTRREQLPSMAPQVPREERRRRRANPTDYRRTVYRHG
IWATSLPDIFGRFRECSADYYRRQPQELDRLIPWLNRELQVLLNNEPTHVAYVLSVIMET
LTQHDIRSPEFRNIVRPFFAIHTDHFAHELLNFAQTNFDLVGYDQSVTYLPRGLSNEYAT
RIESPTSSSSSSSTTSTSSSSSSSSNLTLDNSDVRILTEAIDLRINAEMPNTLPHPISMP
GPSAGQMFRRVETSNVVPELLIVSSESDGDCEIVGYVKPRHERTPEIVELLSSDSEHVCV
PHTLNGNMQSTTRRTHLENISLPSTSYVTKGSSESSGSSTDVLSDSDTNSIQSRRNRSKK
SGKKTQKYKRSDGTGCRNKSSKKKKMSNFSDSSSSENVLKKCNEKRLRKPRYRVQAKGTG
RIKLIKREESYSDEDSSSSDSSSTETDNKTKIKKCCREYKSKRDCFSCVKNDHTAKSGKA
TRSKEKTVNLEKLKSKNKNLNCDENRQSRSRSNSISSSASERDKRSNHKHRECRNTNEFG
SQDDSASINKDMSRSEYKSKSKRKMCYSSDSQDDCLRSCSQCSDYSNKSYSHWKKSKHKE
KYKDKHYRSSSRIFNLSQSNAGTILTMSMSSSKNNMYPTKHSDRNGSDCKVKRKSHKESK
YRKSENEKKSRPKKKKRRLQSSSTSE
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaccattatcgcctcaagctagccttagttcagaattaaggcaaattataaat
gaaagaaatatgttgagcatgcggagccgtatgaaggttctacaagctttaaatgaagat
aatgaaaaatgtacagaggaaaaggaaaaaattctgagatcacaagccattcgagaaata
ctcactacagaagttacgtatttacaacaattggaaatcttagcagaattttttatacag
cctattctcgagagaaaattgttggatcatccattacttgtcactttagctaaaaacata
aagactttatataatgtgagtggtgaactagtggcaggattaaaacataatcctgataac
atagctggagtgttttacaaacttgcaccattttttaagttatattccatttatgcttat
gattatacacaagtactaaatttactacagataagtgaagagaatgattctgtcttcaaa
aaatttatttgtgatcaagaaacaagaccagaagtaggcagaaaattgtcttcattgtta
attacaccagtacaaagagtaccgaggtatcagttacttgttaaacaagtattacaacat
actccttacagacacagagaatatagatatttacaggcatgtctggttgaaattgaaaaa
tctgcgaaacatataaatactttaatcgcacaaaatgaagaaacacaaaaattattaaat
cttcaaaagtgcattgttacttccattaaccttgtcaagcctggtagaatgttaatcaaa
caaggatcattgatgcgtgtttcaagacgaggcaattcagcttataggcgatattttgtt
cttttaaatgacactcttttgtattgtaaaggtgaaccagagacatcactgaacgtatct
tgcgttctaccattaaacaagtgcagtttaacttgcgttctgagcaaaaaattgtttcgt
ataacatgcttgcatgaaacattcttactgtactcggaaaaagcggatagtgccgaatgg
atacaatcgatacaaagtgctattaaaaaatacactgaatgtagacaaactttaagaaaa
gaaagtagctcgagaaagccacttaggcacaaaaatattaatgaatttgatgagtttgag
tcagatggtatatcaaaaaaatctattaaaagaaaaagatgtataaaagatgaacagata
tcattggacacctccagcataatatactttaaaaaggataatgaaatggatgaggatatt
caaaacagtaatactatttgtttatctttttctaccaaaagatttaaacaaaatgagtat
tccaaacctgggcatacttctccccaagtaaaaaatacaaagctgaaattgtgtaaaaat
aaaaataaaaaacgacctatatctacacatagatacttaaaaaagtcaagtcactgcaat
tataatgagactcttccaatgacaacaacgataaatggaccaagtttatgttcgatcata
tcgaatgacgaagaacacacatctccattccaaatgatgagtgatttcttcaaatttatc
ggtacaacaataaaagactttatagcaatggaaggtccactagaaataaagaaccccagt
gcagatgtggaagaacctataaaatctgaaattcttgtacaaaattctgataataacgaa
cgaaacgatgcaacctctccacctccaaattgtagcatttgcttgggaaagttagttaat
acatcttttacagacagttgtctgcatcaattttgttttacttgcttacttcaatggtcc
aaaattaagacggaatgtcctttatgcaaacaaacattcaaatcaattatacacaatgta
agatcagaagaagattatgatcaatatcacgtaccccgtgaattggcatcgcaaattcct
cagtcacaagtaaatgctagtttggatgttaactttgatgtcgattgggctgctgctcct
cgtcgatttgtttacagaacaacgatgactggcaatcgtcgacatggagtgttattgaat
ccagaacaggttacaagacgtgaacaattacctagtatggcacctcaagtgcctagagaa
gaacgtagacgtagacgtgctaatcctacagattatcgtcgtacagtttataggcatggt
atatgggctacttcattacctgacatatttggacgtttccgcgaatgtagtgctgattat
tatagaagacaaccacaagaattagatcgtcttataccatggttaaatagagagttgcaa
gttttacttaataatgaaccgacccatgtcgcttatgtgttgagtgtaataatggaaacc
ttaactcaacatgatattagaagtccagaatttcgaaatatcgttcggccctttttcgct
atacatacagatcattttgcacacgaattgttaaattttgcccaaaccaactttgattta
gtgggatatgatcaatctgttacttatttgccacgtggtttatcgaatgagtatgcaact
cgtattgaatcacctacatccagtagcagtagcagtagcactaccagtaccagtagcagt
agcagtagcagtagtaatcttactttagacaactctgatgtacgaatacttactgaagca
atcgatttgagaataaacgctgaaatgccgaataccttaccacatcctattagcatgcca
ggtcctagtgcaggacagatgtttcgcagagtagaaacatctaatgttgtaccagaactg
ttaatcgtttcatctgaatcagatggcgattgtgaaatagttggttatgtaaaaccacgt
catgaaagaacaccagaaattgtagagttactttcttccgactctgagcatgtgtgtgtt
cctcatacattgaatggaaatatgcaatcgactacaagaagaacacatttggaaaatata
tcattaccgagtacgtcttatgttacaaaaggatcgtctgagtcgtctgggtcaagtact
gatgttttatctgacagtgatactaattcgatacaaagtagacgaaatcgttcgaagaaa
tcagggaaaaaaacgcaaaagtataaaagatcagatgggacaggatgccggaataaatca
tctaagaaaaagaaaatgtccaattttagtgattctagctcatctgaaaacgtattaaag
aaatgtaatgaaaaacgattgagaaagccaagatatagagtacaagctaaaggtacagga
cgaataaaacttattaaaagagaagaaagctattcagatgaggattcatctagcagtgac
agtagtagtacagagactgataacaaaacgaaaatcaagaagtgttgcagagaatataaa
tcgaaaagagattgtttctcttgtgtaaaaaacgatcatacagcgaaaagtggaaaagca
acgagaagtaaagagaaaactgtcaatcttgaaaagttgaagtctaagaataaaaatctg
aattgtgacgaaaacagacaatctagatctagaagtaatagtatatcttctagcgcttct
gaacgagataaaagatcaaaccataagcaccgagaatgtcgaaatacgaacgagtttgga
agtcaagacgatagtgcctcaataaataaagatatgtcaagaagtgaatataagtctaaa
tcaaaaaggaaaatgtgttattcttcagattcgcaagatgattgtttaagatcttgtagc
cagtgtagcgattattccaataaatcctattcgcattggaaaaaatcaaaacataaagaa
aaatataaagataaacactatagatccagtagcagaatatttaatttatcgcagtctaac
gcaggcacgattttaacgatgtctatgtcatcatcgaaaaataacatgtatccgacgaaa
cattccgatcgtaacggttccgattgtaaagtaaaacgtaaatcacacaaagagtctaag
tatagaaaatccgaaaatgaaaaaaaatcaagaccaaagaaaaaaaagcgacgtcttcaa
tcttcttccacttcggaataa
DBGET
integrated database retrieval system
