KEGG   Cyphomyrmex costatus: 108780888
Entry
108780888         CDS       T11118                                 
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
ccoa  Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccoa04131]
    108780888
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccoa04147]
    108780888
Membrane trafficking [BR:ccoa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    108780888
Exosome [BR:ccoa04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   108780888
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_LRRK2 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st HEAT_GCN1
Other DBs
NCBI-GeneID: 108780888
NCBI-ProteinID: XP_018404218
LinkDB
Position
Unknown
AA seq 942 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLCSLYQGHVNIWNYETQTLVKTLEVCDLPV
RTAKFVPRKNWVITGSDDMQIRIFNYNTLERVHSFEAHSDYVRCIAVHPTQPYILTSSDD
MWIKLWNWEKVWICHQVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSSTANFT
LEGHEKGVNCVDYYHGGDKPYLISGADDRYVKIWDYQNKTCVQTLGGHTQNISAVCFHPE
LPIFLTASEDGTVRIWHAGMYRLESSLNYGFERAWTIACMRGSNNVAIGYDDGSVMVKVG
REEPAVSMDSLGGKIVWARHSEIQQVNLKALGEEAQDGERLPLAVKDMGACEIYPQTIQH
NPNGRFLVVCGDGEYIIYTSMALRNKAFGQASEFVWAADSSQYAVREGNTSVKVFKNFKE
KKSFKPDFGADGIFGGFLLGVSSGSGLSFFDWDTLKLVRRIDIQPTHVYWAENASLVALA
TSDQYFILKYHSDAVVNATENSEDIENAFEMVAEMSEVVKTGLWVGDCFIYTNSVNRINY
FVGGEVVTVSHLDRPMYLLGYVPRDNRLYLCDKELSVVSYSLLLSVLEYQTAVMRKDFET
ANRVLPTVPKEHRTRVAHFLEKQGFKEQALAVSTDPEHRFELALALGNLATAHTLAKEAN
SQQKWRQLASLATQKGKLCLAQECLHQAQDFGGLLLLATSTGNSDMIEKLGTVADDTGKN
NISFLSNFILGDVDKCLDILIKTDRIPEAAFFARTYAPSKISAIIKLWKEKLSAVSEKAG
QSLADPEQYENLFPGYREALKVEKFLREESKKKIPASAFPAVTSNIERKPLEEMLAAEQS
GAFQYKDAVSSTSEIEEKPTEAMIDRLQDLSISGIKDNFSLNKATTSTVKREVSEKVTTK
PTSSSRPLTMDDDDLDIDLEIDDNIDTTGVNLDDDLPDLEED
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgcctttacgattagacatcaaacggaagctgacggctagatcggacagagtgaagagt
gtggatcttcacccgactgagccatggatgctctgctcactgtatcaaggccatgtcaat
atctggaactacgagacacagaccctggtgaagacactcgaggtgtgcgatctgccagta
cggacagcgaagttcgtgccacgcaagaactgggtcatcactggctctgatgacatgcag
atcagaatatttaattataacaccttggaacgtgttcactcgtttgaagcacacagcgat
tatgttagatgtatagctgtacatccaacacagccgtacatacttacaagtagtgatgat
atgtggataaaattatggaactgggagaaagtctggatctgccatcaagtatttgagggt
cacacgcactacgtcatgcagattgtatttaatccaaaggacaacaatacttttgccagt
gcttcccttgacagaaccgtcaaagtgtggcagctcggttcgtctacggctaattttact
ttagaaggtcacgagaaaggtgttaactgcgtagattattaccatggtggtgacaagccg
tatctaatatcaggagctgatgacagatacgtcaagatatgggattatcaaaataagact
tgtgtacagactttagggggccacacacaaaatatttccgctgtatgtttccatccagaa
ttgccgatctttctcacggcctcggaggatggtaccgttagaatatggcatgcaggaatg
tatagattggagtcttctcttaactatggcttcgagagagcatggaccatagcatgcatg
cgaggttcgaacaacgttgccatcggatacgacgatggtagtgttatggttaaagtcgga
cgagaagaaccggctgtttcgatggattcattgggtggcaagatcgtgtgggctcgtcac
agcgagatccagcaagtaaacttaaaagcgttgggtgaagaagcacaagatggagagcgg
ctaccgttagctgtcaaagacatgggtgcctgtgaaatatatccacagaccatacagcac
aatccaaacgggcgattcctagtggtctgcggtgatggagaatacattatatacacatca
atggcgttgagaaacaaagcgtttggacaggcatcagaattcgtgtgggcagcagattca
agccaatatgcagtgagggaaggtaacacgtcagtaaaggtcttcaaaaacttcaaggag
aagaaaagctttaagccagatttcggagcagatggcatctttggtggatttttacttggt
gtctcgtccggatctggcctctccttctttgattgggatacattaaagttggtccgtcgc
atagacatacaacctacgcacgtgtattgggccgaaaatgcctcgctagtggcgttagct
acgtcagaccaatattttatactaaagtatcactcggacgctgtcgttaatgccacggaa
aactctgaggatattgaaaatgcgttcgagatggtagcagaaatgagcgaagtggtgaaa
actggcttatgggtcggagattgtttcatctacactaacagcgtcaatcgtattaattac
ttcgtcggcggcgaagtggtcactgtctcccatctggacagaccaatgtacctgctggga
tacgtaccaagagacaacagattatacctttgcgataaagaattatctgtcgtctcgtat
tctttgctattatcagtactggaatatcagaccgcagtcatgcgaaaagattttgaaact
gccaatagagtattgccgactgtcccgaaggaacatcggacgcgagtagctcacttttta
gaaaagcagggtttcaaagaacaagctttggcggtgtcgacagatcccgagcacagattc
gagctagcacttgcgttaggaaacctcgcaacggcacatactcttgccaaagaagcgaac
agccagcagaaatggcgacaattggcgtccctcgccacgcagaaagggaaactttgtttg
gcgcaagaatgcctgcatcaagcgcaagatttcggtggtcttttgttactagctaccagc
acaggaaactcagatatgatagaaaagctcggtacggtggcggatgatacaggaaagaac
aatatctcctttttatcgaactttatattgggcgatgtggacaaatgtcttgacatttta
atcaagacggacagaattcccgaggccgctttctttgctaggacatacgcgcccagtaaa
atctccgccattatcaaattgtggaaagagaagctttcagcagtaagcgagaaagccgga
caaagtttggcggatcctgagcagtacgaaaatcttttccctggatatagagaagccctg
aaggtggaaaaattcttacgagaagaaagtaaaaaaaagattccagcttctgcatttcct
gctgttacgtccaatatcgagcgaaaaccattggaggagatgttggccgccgagcagtcg
ggcgcatttcaatacaaggacgccgtgagcagtacctccgagatcgaggagaagccgact
gaagcaatgatcgacagattgcaggatctttcaatatcagggataaaggacaacttctcc
ctaaataaagcaaccacatctaccgtgaagcgagaagtatctgagaaagtaacgacgaag
cctacgagtagttccaggcctctcacaatggacgacgacgatttagacatcgatttggaa
atcgacgataatatcgatactacaggtgtcaatctcgatgatgatcttcccgatctcgaa
gaagattaa

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