Cyphomyrmex costatus: 108780923
Help
Entry
108780923 CDS
T11118
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108780923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108780923
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108780923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
TPR_14
Motif
Other DBs
NCBI-GeneID:
108780923
NCBI-ProteinID:
XP_018404268
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MVKSMGDIAHADMLPADTNRLAADSGFSELLRSAEQLSATVEGNEDLPQVERNLRQILEA
SNELWSRVTQTSTQDNEAQAHVLLGSRGVDLSQISQKLNSLSTRRTFEPLDPIADTDIVS
YLRNEKENAILSIIEQVHKDTFELTRAQQMEHMLGEWKQMRFEIINAMTAPSGELVDLRG
APQRTKLAGSMISGLSNIEVAYVKELQTYNDHVLRGVTRPSLFNTFYKASESFNDKKIVD
LWQMVKCMVDIPPTPRGDQIKSRSSSAIEQRIVSQARKYLENRYRDFMNSIINENLVQAK
RGGIPGTIPLVKSFVGVKVQNLRDLEDTKMEDKPLWPLVYYCMRSGDYKAALQCLNQCDT
EFPEFKAALEEACDDLQHRPSSRAESILKLHYRKQVRSVTDPYKRAAYCTLVPCELDDFH
SEVISTADDYLWLKLCQVRDQADVENKLTLDYLQTTISEIYGETYYHAHEQPFLYFSMLF
LTGQFEAAIEFLATGAGARHLPHAVHLAAAMHEHNLLAVSQSVLAPLISVDPADKPPTKR
LNFARLILLYVKRFESSDPKESLHYLFLLRCMKDPYDRNMFAASAAEMVVDASPANRVLL
VGKLDKDRRLPGILDQFQINTDDVINICAETLYRKGLLEDAVMMYDLARNHEKVLSLMCT
LLTQVVSQRGPPGSLRGRLQTTAMDISTRYKDIPIQAPSEVVSSFYTLKDLMVFFDQFHN
EQYQSALRTIADSKMLPLQVTEVDERVNVLRRVSPEVAGTLADVLLATMTILYRQYRKLR
SVEPGDKIAREQQLHDLREQARALTSFAGTLPYRMPNETNSKLVQMEILMH
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggttaagagtatgggcgacatcgcacacgcggatatgttgcccgccgacaccaaccga
ctggccgctgattccggcttcagcgaattattgagatcagcagaacaattgtccgcaact
gtcgaaggaaatgaggatctgccgcaagtcgaaagaaatctgcgtcaaatattggaggcg
tccaacgagctgtggtctcgagttacgcaaaccagcacgcaagacaacgaagcacaagct
catgtcttactaggatcccgtggagtagatctatctcagatttcacaaaagttaaattcg
cttagtacacgacgtacgtttgaaccattagatcctattgcagacaccgatattgttagt
taccttaggaatgaaaaagaaaatgcgattctatctatcatcgaacaagttcacaaagat
acatttgagcttacaagggctcaacaaatggaacatatgctgggtgaatggaagcaaatg
cgttttgagataataaacgccatgactgcgccatccggcgagttggtagacttgcgtggt
gctccgcagcgcacaaaactagccggttcgatgatcagtggtctctctaacatagaagtc
gcctatgtaaaggaattacagacttataacgatcatgtactcagaggtgtaacacggccc
agtttatttaacacgttctacaaagcttccgagtcctttaatgacaagaagattgtagat
ttgtggcaaatggtgaagtgtatggtcgatattccaccgacacctagaggagatcaaatt
aaatccagaagcagctctgcgatcgagcagagaattgtttcacaagctagaaagtatttg
gaaaaccgatacagagatttcatgaattcgataatcaatgagaatttagtacaagcgaaa
cgaggtggcattccaggtactatacccctagtcaagagcttcgtgggtgtaaaagtacaa
aatttaagggatttggaggataccaagatggaagacaaaccgttgtggccattagtgtat
tactgtatgcgatctggggattacaaagctgcactacaatgcctgaatcaatgtgacaca
gaattcccggaatttaaagcggctctcgaggaagcttgcgacgatctgcaacatcgtcca
agcagtcgggccgagtctatcctaaaattgcactacaggaaacaagtacgatctgtaact
gatccttataagagagcagcgtattgcacattagttccttgcgagttggatgacttccac
tccgaagtgatatctacagctgacgattacttgtggctaaagttgtgccaagtgagagat
caggcagatgttgagaataaacttacgttggactatctgcagactacaatttcagaaata
tatggagaaacttattatcacgcacacgaacaaccatttttgtacttctcgatgctgttt
ttgactggacagtttgaagcagcgatagaattcttagctacgggtgctggagcgagacat
ttaccgcacgctgtccatttggcagctgctatgcacgaacacaacttgttagctgtcagt
caaagcgttttagcgcctttgataagcgtagatcctgccgataagccgccaacgaaaaga
ttaaattttgctagattgatactgttgtacgttaaaagatttgaatcatcagatccaaaa
gagagtcttcattatttatttttattaagatgtatgaaggacccgtacgatcgtaatatg
ttcgccgcttctgctgcagaaatggtagtagatgcttcccctgcaaaccgcgttttgtta
gtcgggaaacttgacaaagatcgcagacttccagggattttagatcaatttcaaatcaat
acggatgacgtgataaatatatgtgccgaaacgttgtacaggaaaggtttactggaagat
gcagttatgatgtacgatttagctaggaatcatgagaaagttctcagtttgatgtgtaca
cttttgacgcaagttgttagtcaaagaggaccgcccggttctctcagaggacgattacaa
accacagcaatggatatcagtacaagatacaaggatattccaatccaagcgccttcagaa
gtagtgtcttcattttataccttgaaggatcttatggttttcttcgatcaattccataac
gagcagtatcagagcgcactcagaactattgcggattcgaagatgttacctcttcaagta
acggaagttgatgaaagagtgaatgtcttacgtcgagtatcgcccgaagtggctggcaca
ttagctgatgttcttctggccaccatgacgatattgtatcgtcagtatcggaaattgcga
tcagtagaaccaggtgataaaattgcgagagaacagcagttgcacgatctccgagagcaa
gcccgagcgttaacgagtttcgcaggaacattaccatatcgcatgccaaacgagacaaac
agcaaacttgtacaaatggagattcttatgcattag
DBGET
integrated database retrieval system
