Cyphomyrmex costatus: 108781062
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Entry
108781062 CDS
T11118
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108781062
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoa01007
]
108781062
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoa03016
]
108781062
Enzymes [BR:
ccoa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
108781062
Amino acid related enzymes [BR:
ccoa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108781062
Transfer RNA biogenesis [BR:
ccoa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108781062
Prokaryotic type
108781062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Arc1p_N_like
ENTH
Motif
Other DBs
NCBI-GeneID:
108781062
NCBI-ProteinID:
XP_018404435
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MNVKDNEVAIAENGPQKTAKQLQKEAKKLAKLEKFKQKQEKKETKELINVKEKPEKNDKK
KDTTSTLYNINTSPGEKKDVICPLPDTYSPQYVEAAWYAWWEKEGFFKPEYGRKDVLEKN
PKGNFVIVMPPPNVTGFLHLGHALTNAVEDTITRWNRMKGRTTLWNPGCDHAGIATQVVV
EKKLWKEEKKSRHDIGREEFIKRIWQWKYEKGDRIYTQLRKIGGSFDWSRACFTMDPKLS
KAVTEAFVRLHDEGIIYRSNRLVNWSCALKSAISDIEVDKVELNGRTLFSVPGYKKKVEF
GVLVSFAYQLLDLEDKIIVATTRIETMLGDTAVAVHPKDSRYIRYIGKYVQHPFCNRHIP
IIADEFVDMEFGTGAVKITPAHDPNDYEVGKRHNLPFINIFDDDGNIIGDYGEFTGMKRF
EARVAIIKEMTKRNLLIDVKDNPMVIPICSRSKDVVEPLIKPQWYVKCDEMAAQAREAVS
TGALKIIPEQFKKTWYIWMDGIRDWCISRQLWWGHRIPAYAIKFINSRENMKKIDEYWVS
AHSEAEAREKAAKKLNVNVNDIITEQDPDVLDTWFSSALFPFSIFGWPDKTPELKAFYPT
TLLETGHDILFFWVARMVFMGQKLLGQLPFKEVYLHAMVRDAHGRKMSKSLGNVIDPMDV
IKGISLKDLQKQLLDSNLDPKELERAQECQKRDYPQGIPECGTDALRFALCAYTTQGRDI
NLDILRVQGYRFFCNKIWNATKFALSYFGSQFKYDTNDRKLNNANCIDVMGNGKWYQWTL
NESCVQKALNNYLADYPYLDGYTPSQLDLSVYRSLKELNIDFARHLHIKRWYNHIATFTN
EEKAVFRVEQDKIIPKLAYINQNQTNNDDIFELTGNETNVDLWMLSRVSYAAGTCDEAIK
QYDFALATTTCYNLWLYDLCDVYLEYLKTIFQSEDNATKLAAQNVLFITLDVGLRLLSPF
MPFITEELYQRLPRKKLIYPSICVSPYPDDVKCCWRNQEIEKDVDFAQKIIKNIRSARAT
YNLPNKTKTEAYVICSDPALKEKIIRYKLLIETLAYSILSTQKPPVGCAIVTITDKIQVH
LLLQGLIDPKKELEKLQKKESQLYEIIQKLKQDLAIPDYDVKVPLDVQKNNKEKLVNNEG
ELQRIIDAIMVLQTMKKNLSTKAALSKKDRTAYSERSMILVSHPCLIIGEQQRYTDTLHH
TVSSVSLILEDTLFPRFKVWLEEQRFSSNEEIIAPVEASILQSKTPTII
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaggacaacgaggtcgcgattgcggaaaatggcccgcagaaaacggccaaa
cagctgcaaaaggaagccaagaagttagccaaattggagaaatttaaacaaaagcaagag
aaaaaagagaccaaggaattaataaacgtgaaagaaaaaccagagaaaaatgataagaaa
aaagatactacatcaactttatataacatcaatacatcacctggagaaaagaaagatgtt
atatgtccgttaccggacacatacagccctcaatatgttgaagctgcatggtatgcttgg
tgggaaaaggagggattttttaaaccagaatatggcagaaaagatgtcttagaaaaaaat
ccaaaaggaaattttgtaatagtaatgccaccacctaatgtaactggtttcttacatctc
ggacacgctttaactaatgctgtagaagatactattaccagatggaaccgtatgaaaggg
cgtacaacactctggaatcctggttgtgatcacgcgggtatcgccactcaagtggttgta
gagaaaaagttgtggaaagaagaaaagaaatctcgtcatgatattggtagagaagaattt
attaagagaatttggcaatggaagtatgaaaaaggcgatagaatttatacacagttgaga
aagataggtggttcctttgattggagtcgtgcttgttttacaatggatcctaaattaagt
aaagccgtaacagaagcatttgtgcgcttgcatgatgaaggtattatttatcgcagcaat
cgtttagtcaattggtcttgtgctttaaaaagtgcgatttcagatattgaagtcgataaa
gtggaattaaatgggcggactctgttttctgtacctggctacaaaaagaaagtagaattt
ggagttttggtatctttcgcttatcagctccttgatttagaagataaaataattgtggcg
accacacgtattgaaacaatgttaggagataccgctgttgccgtgcatccaaaggacagt
agatatattcgatatattggaaaatatgtgcagcatcccttttgtaacagacatatacct
attatagcagatgagtttgtcgatatggaatttggcacaggtgctgtcaaaattacacca
gcgcatgatccgaatgactatgaagttggaaaaaggcacaatttgccattcatcaatatt
tttgatgatgatgggaatattattggagattatggcgaatttacgggaatgaaaagattt
gaagccagagtggctatcattaaagaaatgacaaaaagaaatctattaatcgatgtaaag
gataatccaatggtgatacctatatgtagtcgatcgaaagatgttgtcgaacctctcata
aaaccacaatggtatgttaagtgcgacgaaatggctgcacaagctagggaagcagtaagc
acaggtgctctgaaaataattccagaacaatttaagaaaacttggtatatctggatggat
ggtattagagattggtgtatttcgcgtcagctttggtggggtcatcggattcctgcttat
gcaattaaatttatcaattctcgcgagaacatgaaaaagatagatgaatattgggtgagt
gcgcattccgaggctgaggctagagagaaagcggccaagaaattaaatgttaatgtaaac
gacattattacggagcaagatcctgatgtattagacacttggttctcttctgctcttttt
ccattttccatttttgggtggccagataaaacccctgagctcaaggcattttatccgact
acattgttagaaactggtcatgatatactcttcttttgggttgccaggatggtctttatg
ggccaaaaattgttaggacaattgccttttaaggaagtatatttgcatgcgatggtgaga
gatgcgcatggaagaaaaatgagtaaatccttgggaaatgtaatagatcctatggatgtg
attaaaggaatatctttgaaagatcttcaaaaacaattgttagattcgaacttggatcca
aaagaactggaacgagctcaagagtgtcaaaagcgtgattatccgcaaggcattcccgaa
tgtggaacggatgctctgcgattcgcgctctgcgcttacactacccaaggacgagatata
aatctcgatatacttcgtgtacaaggatacagatttttctgcaataaaatatggaacgct
acaaaatttgcactctcctattttggatctcaatttaaatacgatacaaatgataggaaa
ttgaataatgctaattgtattgatgtgatgggaaatggcaagtggtaccagtggaccttg
aatgaatcgtgtgtacagaaggcgctaaataattacctggctgattatccgtatctcgat
ggttatacaccttcgcaacttgatctatcggtttatcgatcattgaaagaattgaacatt
gattttgcaaggcatctacacattaaacgctggtacaatcatatcgcgacatttacaaat
gaagaaaaggctgtgtttcgtgtggaacaagataaaataataccaaaacttgcatacatt
aatcagaatcaaaccaataatgacgatatatttgagctaactggaaatgagacaaatgta
gatttatggatgttatcgcgtgttagttacgctgccggaacttgtgacgaagcaattaaa
cagtatgactttgcattagctactactacctgttacaatttatggttatacgatctgtgt
gatgtttatctggaatatcttaaaacaattttccaaagtgaagataacgcaactaagtta
gcagctcaaaatgtattatttataacactagatgtgggattgcgtttattgagccccttt
atgccgtttataacagaagaactgtatcaacgtttacctcgtaaaaagttaatatatcca
agtatatgtgtaagtccatatccagatgatgtcaagtgttgttggagaaatcaagagatt
gaaaaggatgttgattttgcacaaaaaataattaagaatattcgatctgcccgtgcgaca
tacaatttacctaataaaacgaaaaccgaagcatatgtcatatgtagcgatccagcttta
aaggagaagattattcgatataaattactcatagaaactcttgcatactctattcttagt
acgcagaaaccaccagtaggctgtgctattgtcactataactgacaagatacaagtgcat
ctattattacagggtttgattgacccaaaaaaagagttggaaaaactacaaaagaaggaa
agccaattgtacgaaattatacaaaagttgaaacaagatttagcaatacccgattacgat
gtaaaggtacctcttgatgttcaaaagaacaacaaagaaaaattggtgaataatgaaggc
gaactgcagcgaattattgatgcaataatggttttgcaaacaatgaagaaaaatttatcg
acaaaggctgctttgtctaaaaaggacagaacagcttatagtgaacgttcaatgattctt
gtttctcatccttgtttaattattggcgaacaacaaagatatactgatacactgcatcat
accgtgtcatctgtgtcgcttattttggaagacaccctgtttcctagattcaaagtttgg
ctcgaagaacagagattttcatcgaacgaggagattattgcacccgtagaagcttctatt
ttgcagagcaagacgccaactattatttaa
DBGET
integrated database retrieval system
