Cyphomyrmex costatus: 108781091 Help Entry 108781091         CDS       T11118                                  Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism ccoa  Cyphomyrmex costatus Pathway ccoa03040   Spliceosome Brite KEGG Orthology (KO) [BR:ccoa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     108781091  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ccoa03041]     108781091 Spliceosome [BR:ccoa03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     108781091  Complex C    U5 SnRNP specific factors     108781091 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PRP6_TPR PRP1_N TPR_14 HAT_PRP39_N TPR_19 TPR_17 TPR_16 Suf HAT_Syf1_CNRKL1_N CFAP70_TPR_C HAT_Syf1_CNRKL1_C HAT_PRP39_C TPR_2 TPR_8 TPR_11 TPR_15 TPR_CcmH_CycH TPR_MalT ARM_TT21_4th NatA_aux_su Motif Other DBs NCBI-GeneID:  108781091 NCBI-ProteinID:  XP_018404474 UniProt:  A0A195C3F3 LinkDB All DBs Position Unknown AA seq 931 aa AA seqDB search MAVSSVSLNTRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPT KRTKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRK EYREKRLREELERYRQERPKIQQQFSDLKRELVNVTEDEWKNVPDVGDARNRKQRNPRAE KFTPLPDSVLARNLGGETSTSIDPSSGLASIMPGVATPGMLTPTGDLDLRKIGQARNTLM NVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPA WIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPPDTAKAVIAQSVRHIPT SVRIWIKAADLEMEVKAKRRVYRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVECCP TSVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIERAI SSLSANGVEINREHWFKEAMEAEKAGAVHCCQVIVKAIIGFGVEEEDRKHTWMEDAEACA QQGALECARAVYAYALTTFPSKKSIWLRAAYFEKTYGTRESLETLLQRAVAHCPKSEVLW LMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARAS APTPRVMMKSAKLEWALNSLDAALHLLQEALEAFDDFPKLWLMKGQIEEQQGYLDKAICT YNQAIKKCPNSIPLWCLLARLEHRKNQVTKARSVLEKARLKNPKNAELWLEAIRNELKNG GARDMANTLMAKALQECSTSGLLWAEAIFMEPRPQRKTKSIDATKKCEHDPYVLLAVSKL FWCEHKISKCRDWFNRTVKIDSDLGDAWAYFYKFELLNGTEEQQEDVKKRCIAAEPHHGE NWCKVSKNIANWCLSIDQILVLVAKELPIPI NT seq 2796 nt NT seq  +upstreamnt  +downstreamnt atggcagtttcctcggtttcgctaaatacgcgaaataaaaaacattttttaggtgtaccg gcacccttgggatatgttgctggtgttggtagaggagcaactggatttacaacacggtct gatattggtcccgctcgagatgccaatgacgtttccgatgacagacatgctccacccacg aaacgtacaaaaaagaaggaagaagaagaggaagatgaagaagacttgaacgattcaaat tatgatgaattttcaggatatggaggttctctttttagtaaagatccttatgataaagat gatgaagaagcagatgcgatttatgaggctattgacaaacgaatggacgagaaacgtaaa gaatatagagagaaacgtcttagagaagaattggaacgctatcgtcaagaacgtcccaag attcaacagcaattctcagatctaaaaagagagttggttaatgtaactgaagatgaatgg aagaacgttcctgatgtaggagatgctagaaatcgaaaacagcgtaatccaagagcagaa aaatttactccattaccagattctgttctggcaagaaatttaggaggagagacatctacc agcattgatccatctagcggtttggcttccataatgccaggtgtggcaacacctggtatg ttaactcctacgggagatcttgatctcagaaagattggacaggccagaaacacattaatg aatgtcaaattaaatcaggtttctgattctgtggaaggtcaaactgtggttgatccaaag ggataccttacagatttacagagcatgattcctacttatggtggtgacataaacgacata aagaaagccagattattgttaaaatccgttagagaaactaatcctaatcatcctcctgcg tggatcgcatctgcgcgtctagaagaagtaactgggaaggttcaagcagcgagaaactta ataatgaaaggatgtgaagtgaatcctacttctgaagatctgtggttggaagctgcgaga ctgcagccaccagacacggcgaaagcagtaatagcgcaatcggtgcgccatattccgaca tccgtgagaatttggataaaggccgcggatttagaaatggaagtaaaagcgaagcgaaga gtgtatcgaaaagcattggaacatattccaaattcggtacgactgtggaaagcggctgtc gagttagaagaacccgaggatgcgcgcatcttactcagtcgtgcagttgaatgctgtccg accagtgtagatttgtggctagctcttgctagattggaaacttacgataatgcaagaaaa gttttaaacaaagctagggagaatatcccaaccgatagacaaatttggactactgctgca aaattggaagaagcaaatggcaataaacatatggtggagaagattatcgaacgcgctata tcctcattaagcgcaaatggagtagagattaatagggaacattggtttaaagaagctatg gaagctgaaaaagcaggagcagtgcactgctgtcaagttattgttaaagctattatcggt tttggagtagaagaagaggacagaaaacatacttggatggaggatgctgaagcttgcgcc caacaaggagcattggaatgcgccagagctgtttatgcttatgcattaacgacatttcct agtaagaaatcaatttggctacgtgcagcttattttgaaaagacatatggtacgcgggaa tctttggaaactttattacaaagagcagtcgctcattgtcctaagagcgaagtgctttgg ctgatgggagcaaaatcaaagtggctggctggtgatgtgccagcagccagaggtatttta tctctcgcgtttcaagctaatccaaattccgaagaaatttggttggcagcagtgaagctt gaatctgaaaactcagaatatgagagagcgcgacgtttattggcaaaagccagagcatcc gctccgacgcctagagtgatgatgaaaagcgccaagttggaatgggctcttaatagtctt gatgcagcgttgcatctattacaggaagctcttgaagcttttgacgacttccccaaactg tggctaatgaaaggtcaaattgaagaacagcagggatatttagacaaagcgatatgtaca tataaccaagcgatcaagaaatgtccaaattcgatacctttgtggtgtctgttggcgcga ttggagcataggaaaaatcaagtaactaaagcgcgatcagttttagaaaaagcgagactt aaaaatcctaaaaatgcggagttatggttggaagcaatacgaaatgaattgaaaaatggt ggtgcacgcgatatggcaaatacattaatggctaaggcattgcaggaatgttccacatcc ggactgctctgggcagaagcaatttttatggaacctcgacctcaacggaaaacgaagagt attgatgctactaaaaaatgcgaacatgatccatacgttcttttggcggtatcaaaatta ttttggtgcgagcacaagatttcaaaatgtagagactggttcaatagaacagtgaagata gattcagatttaggcgatgcgtgggcatatttttataaatttgaattactgaatggtaca gaagagcagcaagaggatgtgaaaaagagatgtatagccgcagaacctcatcatggcgaa aattggtgcaaagtttccaagaatatagcaaattggtgtctgagtatagatcaaatctta gtattggttgcaaaagaattacccatccctatataa

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