Cyphomyrmex costatus: 108781106
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Entry
108781106 CDS
T11118
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108781106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108781106
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108781106
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108781106
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108781106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
108781106
NCBI-ProteinID:
XP_018404493
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MDRSNITSPLGKTVASPRKRLSIIQSLKKNGSTTSAAGRTNQSIQVICRTQSHIVENFGS
PLPVLVTEALTFVDRNTAVSVNISENGWAWLVYGRKLLVWQCKANIHDSKQRRTFKTQCR
ELLLPQSDLAHRANCIAVWVLPGHQVPSCMAVSPEGVVRFWTSVAHEGSSVETSAELAGQ
EVDCLIHVPGHGCILATTTCTVALLQPQFNNGKNNITCQVLRTSQGWLGGIGRKMTSLIF
GAIPQSPVTETKLVKVTCTLLNERGSRVLILAGSSLQYWFFSHNEQEKMEFDEDITDIVQ
QAFQRKIWESSPQNMSTWFVDMQTCEEGIVLLMAAYCADISIQIHFALGLLPLVGTTLSN
SFKWFIPVKIDPIFYHNDIESWLASYHFILCGWEAIIYSRDNVLVVNTASEVEQDKIDLV
RGSEDGILGGAICSSTPVLFTKSIGLVSVVPVDFAVQDFNTGYTDTTMSMDYTYKVNQTV
QNFSTLISNDELQDMYCSSDTVTQLRAAFLLSLRQNKAQSNEILSQLFPLQEDPVMDINA
TLDTLVLKVAKDLIDDYPANDPRWSQHRDLSITMNAVTSMQIPHQLEGKQKALDLFIMFL
KEHNLWNRFCAVTCRGTIMSTSHVLGEYAEKIVAALTLYSLQNRYAEIIDAIVNQTLSQK
EAHVSDELTVCDIFYREVSTVHLFLPVLVEKAYEVTQSERPLQQVGQYIMQVNTILLTVL
YEVVKYRQYNAERFVPAKFSNETTEYLPWTAAPGKDGLRNCLNTMQSITIKHGITGTGDS
TVRNELYEQLVSLIDLILDGRKCHLESIRGTEKYEVLLKQYETERANLIQPLIKEEQYDN
AAMLAEKYCDFPSLVQICELTDNKNRLDGYIEKFAVQDFAGFLFSWYVKDGRQGQLVERC
RRGGTAELTEKLSEHPTLSWVQAALTDELRFAANTLHTLAVQESELVTRKKSMLSLAKLA
LLASDESEDKVIDCVKTIDNELTLIAYQEDLPTQVLTTYGYDITKLRVLTPRELIMLYTS
NDNVIANEYDFKKALDLLDYVEHEEDKSSLRLQIWARAARRNQWDNVEKNPEQQVQEMLL
FKLMDLTYFMGGKVDEFLPHIDMLLKEPELGDLATSSNFQFLIKLIYEYAYRSY
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttcaaacataacgagtccgttgggaaaaactgtagcctcgcctaggaaacga
ttgtcaatcattcaatcgctaaagaaaaatggctccacaactagtgcagctggacgtaca
aatcaatctatacaagtaatatgcaggacacagagccatatagtggaaaactttggttct
ccattgccagtcctggttacagaggcattgacatttgtagatcgaaatacagctgttagt
gttaatatatctgagaatggttgggcctggcttgtctatggacgtaaattacttgtgtgg
caatgtaaagctaatattcatgactccaagcagaggagaacttttaaaactcaatgtcgt
gaattgttgctgcctcagagtgatctagctcatagagcaaattgtatagcagtctgggta
ctgcctggtcaccaggttcctagttgcatggcggtctcaccagaaggagtggtacgtttc
tggacaagtgtggcacacgaaggatcttctgtagagactagtgctgagcttgcaggacaa
gaagtagattgtcttatacatgttccaggccatgggtgcattctagccacaactacatgt
acggtggcactcttacaaccacagtttaataatggaaagaacaatattacatgccaagtg
cttcgaacaagtcaaggatggctcggtggtataggtcgcaaaatgacctcccttattttt
ggagcgataccgcaatcgcctgttacagaaactaaattagtaaaagttacgtgcacatta
ctgaacgaaagaggatcaagagttctcattcttgctggatcttctctgcaatattggttc
ttttctcataatgagcaggagaaaatggaatttgatgaagatatcactgatatcgttcag
caggcattccaaagaaaaatttgggaatcgagccctcaaaacatgagcacatggttcgtt
gatatgcaaacgtgtgaagaaggaatagtccttttaatggcagcctattgcgctgatatt
tccatacaaattcattttgcactcggactattacctttagttggcacaacactatcaaac
tcatttaaatggttcatacctgtgaaaatcgatccgatattttatcacaacgatatagag
tcttggctagcttcttaccatttcatattgtgcggttgggaggcgattatatacagtcgg
gataatgtactcgtggttaacaccgcatctgaggtcgaacaagataagatcgatctggtg
agaggcagtgaggacggtatacttggaggtgctatatgctcatcgactccggtattgttt
acaaaaagtatcggtctcgtgtctgttgtaccggtggactttgcagtacaagatttcaac
accggatatacggacactaccatgagtatggactacacctataaagtgaatcaaacggtc
caaaacttttccactcttataagtaacgatgagttgcaggatatgtactgtagttctgat
acggtcacgcaattacgtgctgcctttctcctcagccttcgacaaaataaggcacaaagt
aatgagattctttctcaactgttccctctgcaggaagatccggtaatggatatcaatgct
accctcgacacgctcgttttaaaggtcgcgaaggatctaattgacgattatccggccaat
gatccgagatggtcccaacatagagatctatcgataacgatgaacgcggtcacttctatg
caaataccacatcagctggagggtaaacaaaaagcactagatctctttataatgttctta
aaagagcataacttgtggaacaggttctgtgcggttacatgcaggggtactattatgtcc
acgtctcacgtgctcggtgaatacgcagagaaaatagttgcggcattgacattgtacagt
ctgcaaaatagatatgcggagatcatagacgcaattgtgaaccaaacgttgagtcagaaa
gaagcacatgtttctgatgaacttactgtttgcgatatattctatcgtgaagtgagcaca
gtgcatctattcctgccagtattggtagagaaagcgtacgaagtcacgcaatccgaaaga
cctttgcaacaagttggacaatacatcatgcaggtcaataccattttattgactgtattg
tatgaggtggtaaagtatcgtcaatacaatgctgaacgcttcgtccctgccaagttttcc
aatgagacaacagaatatctcccttggacggctgcaccgggtaaggacggcttgagaaac
tgtctcaatacaatgcagagcattacgatcaagcatggaataacaggaactggcgactcc
actgtgaggaacgaactgtatgagcaattggtcagtctgattgacttgatattggatggg
agaaaatgtcatttagagagcattcgtggtacagaaaagtacgaggttctcttaaagcaa
tacgaaacagagcgagctaatttgatacaaccgctgataaaggaggaacaatatgacaat
gccgcgatgcttgctgagaaatattgtgactttccttctctcgtacagatctgcgaatta
accgacaataagaatcgattagacggatacatcgagaaatttgcagttcaagatttcgct
ggcttcttattctcttggtatgtaaaagacggacgtcaaggtcaactggttgagagatgt
agacgcggtggtaccgcggagctaacagaaaagctgtcggagcatcctactctgtcttgg
gtgcaagctgcattgactgacgagctgcgattcgccgctaacacgcttcatactttggcg
gttcaagaatccgaactagtcactcgtaaaaaatcaatgctatcgctggccaaactggct
ctgctcgcgtcggacgaatcggaagataaagtgatagattgtgtgaaaacgattgacaat
gaattaacgctcatagcttatcaggaggatctaccgacacaggtgctcactacatatggc
tacgatattacgaagttgcgagtgctcacaccaagagaattaattatgctgtatacttca
aatgacaatgtcatcgccaatgagtatgatttcaagaaggcccttgatttgctcgattat
gtagaacatgaagaggataaatcatcgctgagattacaaatatgggcgcgcgcggctcgg
cgaaatcagtgggacaatgtggaaaagaatcctgagcaacaagttcaggagatgctactt
tttaaattaatggatcttacatactttatgggtggaaaagtagatgaatttttgccacac
atcgatatgcttctgaaggaaccagaactcggagatcttgctacttccagtaatttccag
ttccttataaaattgatatacgaatatgcttatcgaagctattaa
DBGET
integrated database retrieval system
