Cyphomyrmex costatus: 108781147
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Entry
108781147 CDS
T11118
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108781147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108781147
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108781147
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108781147
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108781147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
108781147
NCBI-ProteinID:
XP_018404556
LinkDB
All DBs
Position
Unknown
AA seq
1910 aa
AA seq
DB search
MFGQTGNTSFSGFSTATQNSPFGQSAFGKPITTTSFGSGATPVFGSSNTSSLFSSKPTGA
TTGGLFGNTTTPPAFRQPTNTQPSFGGFGTTNTNTNLFGTQQNAGTNLFGTSPGASAFGQ
ANKPGFNFGTTSGSNLFGQPQQNAQQPTPFGQANTTANTNLFGTTTGFGNTNPTTIPAGT
AVKFTPVITTDSMSKNGISHSISARHCCIASMKEYESKSYEELRFEDYQIGRKGPQTGLF
GTSAQTSPFGSAAAGTSTAGTGFGSMTGGFGTTSQSGSTGLFGKPISNFGTPATTTTNSF
AFNSTPTTNLFGTNTQTKPFGTAAPTPLFGTSNTNQTAGTGFGSINTGQNTGFGSTFGST
QPNQSIGLFNQNKSAFNIPSTSTSAVFTGFGQPATNTTTPLFGNKTTTTGFGTTSTFGAT
ASSTFGTNTGFNSGTNAGSSLFNSSFKPAGQTSGFSFGATPASSSGLGTNTGLNLSGGSS
LFGQQKPGSLFGNAGNNTTFNTSGTFGSSTFGTNSNMISGTGMNSLGGGVTNQTKTNGSV
PVHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPTNPASKVLNSPQYRVTANNKSPKI
KARVVSSTQLSKKSLFDGLEEEDPVITEAFQPRPSAKRLVLRPKLATNSSVQSPTENVES
VTRNDTADDRADTSIVHSNNIEVNDKENHSQDNNRFANDRRSSTSWLKSTIPRKNKILND
ELLEGQQSPFSGTNVSEEVNNTVVELRTQNNISNHSESINLNEVPLNSTFDEKSSVNLTM
QSAESGQETDENSFSMLQSTWTMNMAKVILRRVGYYTIPSLDKLDDFVCGETCIVPNFTI
GREGYGNVYFPDSFDIYGLNLDEIVHFRHKEVIIYPDDEKKPPVGQGLNRKAQVTLDKVW
PHDKSLHEPITDPQRLTAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFSKYGLSD
SDEDDNQIPSTSEAKKLKGFSTAIQKNKLVDPSTINKEAINGTINGTLNGPTKIGNGQHL
SMIESNFLGKVPINHFAYSDHNYEERRMIVSQVDKTTFNRSGFVPGDYNYEKRMTISPIG
DSARVAGTDSHKLQLMKASFFDVNDEDINEETSNDIFPSVQKTLISYFPDITETKNDEVP
YNTSTLRTTLIANKALSPCPENILYTFSRKSHLPSVGIKDKQFIEKTIPPPTITPVTNVL
KYHYEVVPLEESRLNKLRFRCIADTGIYMGRTFRPSWGAGLTLLSLSTQEQAIKMQLRNT
FSQLNHYVSGRLSDDVSSTVIVQRLQIVGGDEYDTKMFKDSIECHLRIQLDHCVMGHEGD
CPTFDVTTDSANEALRLHCTLAQDLAEKEQRPSEDTNDEHIQCGSAERSYRQYASIVWTL
CVALWGNFVDEDTTNNANEEHYNVMMRREAVGEWLKNVVQKTIEQEIKNIDIVTKNSHEK
IILSLLSACKLEEACQEARKVGDHCLALLMAQLRSGATVKKLIKQQLALWQETDVDENLT
IDRLKLFMLVAGEPLISSKHGTINVCEDLDWKRAFAIHLWYLSPPTSSITDALDLYEASF
NTTEAQAYAAIPEPEYKEYDYDAELNNGKRIHDLCFQLLKLYCTGNHDLGELLNPLSYTA
NPLDYRLSWLMQQTLVALGYTHLSDHVVALTHTNFATQLEAHGLWHWAIFIVLHLRDSSR
RRTAVQDLLLRHIEIDDTPEYVKREQFLKEELGISLVWIHQAKAIKSSINKRYGEAAWYY
IQAEQWTQAHEIIIEHLAADAIINENYEYLKSLLSSLVPIECSSTISGWSHQGQLLWEYM
EITSELQSLLKTPDYCGLAYQLETLKPRLTNLCHKIDQFPCSTAKHKLCQAEIAKRTLHL
ARNMLLMQKNEQRSITKLLVRLISQLPLPEDYAQQELRPVVNMRVTEVMP
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggcaaacaggaaatacatcattcagtggatttagtacagcaacacaaaacagt
ccttttgggcaatctgcatttggtaaacccattactacaacaagttttggtagtggagca
acacctgtctttggtagtagcaacacttcatcactctttagttctaaacctacaggtgct
accacaggtggtttgtttggaaataccacaacgccaccggcatttagacagccaactaac
actcaaccatcctttggaggttttggtacaacaaatacaaataccaatctttttggtacc
caacaaaatgctggtacaaacctttttggtacaagtccaggggcttcggcatttggtcaa
gctaacaaacctggttttaactttggcacaacatcaggatccaatctatttgggcaacca
caacagaatgcacagcaacctactcctttcggtcaagccaacaccaccgcaaatacaaat
ctttttggtacaaccacagggtttggtaatactaatcccactactataccagctggtact
gctgtaaaattcacgcctgtcattacaactgattctatgtcaaagaatggaatatcgcac
agtatttcagcccgtcattgttgcattgcatctatgaaggaatatgaatctaaatcatac
gaggaattacgttttgaagattaccaaattggaagaaaaggtccacaaacgggtcttttt
ggaacatcagcgcaaacatcaccatttggtagcgcagcagctggtactagcacagctgga
acaggatttggatcaatgaccggaggatttggtactactagccaatcaggatcaactgga
ctatttggaaaacctattagtaattttggaacaccagcaactacaacaacaaatagtttt
gcattcaattccacgcccaccacaaatttgtttggtactaatactcaaacaaagccattt
ggtacagctgctccaacgccgctttttggcaccagtaatactaatcaaaccgctggaaca
ggctttggtagcattaatactggacaaaatacaggatttggatctacatttggttccaca
caacctaatcagagcattggattgttcaatcagaacaagtctgcttttaatattccatca
acgtcgactagtgccgtctttactggttttggtcaacctgctacaaataccactacacca
ttatttggtaacaaaacgactaccacaggatttggaacaacatctacgtttggtgcaact
gcatcttccacatttggaactaatacaggtttcaattctggcactaatgctgggtcttca
ttgttcaattcgtcttttaaaccggctggacaaacatcaggattttcatttggagctaca
cctgcatcttcaagtggacttggtacgaatactggtttaaatttgagtggtggttcttcg
ttatttggacaacaaaagccaggcagtttgttcggaaatgctggaaataatacaactttt
aacacttctggaacatttggatcttctacttttggaacaaattctaatatgatatctgga
acaggaatgaactcgcttggcggaggagtgacaaaccaaactaaaacaaatggttcagta
ccagtacatcaacaaattttggctctcgtttctgcaccatttggtgattcaccattattg
aagaatcttttaccagcatctggaaagaccgaagaacttttaaaacctacaaatccagca
tcgaaagtattgaacagtccgcaatatagagttactgcgaataataaatctccgaaaatc
aaagctagagttgtcagttctacacaactatctaagaaatcattgtttgatggcctcgaa
gaagaggatcccgtaataaccgaagcttttcaacctcggccaagtgcaaaacgtttagta
ttacgaccgaaattagcaacaaattcttcggttcaatctcctaccgaaaatgtggaatcc
gtgacaaggaatgatactgcagatgatagggcagatactagtattgtgcatagtaataat
attgaagttaatgacaaagaaaatcacagccaagataataatcgttttgcaaatgatcga
cggtcatctacatcttggttgaagtcgacaattccacggaaaaataaaattttgaacgat
gaattgctcgaggggcagcaatcacccttttctggaacaaatgtatccgaagaggtgaat
aatacagtggtcgaattaagaacgcaaaataatatatcaaatcattcagaatcgattaat
ttgaatgaagtgccactaaattctacttttgatgagaaaagttctgtgaatcttactatg
caaagtgcagaatccggtcaagaaacggatgaaaattcattttcaatgttacaatcaacc
tggactatgaacatggctaaagttatattacgacgagtaggttattataccattccgtcg
cttgacaaactagacgatttcgtttgcggcgagacatgtattgtaccgaactttactatc
ggtcgcgaaggttatggcaacgtatattttccagactcatttgatatttatggtctgaat
cttgatgaaatcgtacattttcgtcataaagaggtaattatttatcccgacgatgagaag
aagccaccagtgggacaaggcctgaatcgaaaggcgcaggtcactttagataaggtatgg
ccgcatgacaagtcgctgcacgaaccaattacggatccgcagcgactcaccgcgatgaat
tacgaaggaaaattacgtagagtatccgcgaaacacgacacccgtttcctcgagtatcga
ccggaaactggctcgtgggttttcaaagttgaccacttttccaagtatggtctcagtgat
tcagacgaggatgacaatcagatcccgtcaacttcagaagcaaagaaattgaagggattc
tccacagctatacaaaagaacaagcttgttgatccatcaacgataaataaggaagcaatc
aatggaacgattaacggaacgcttaatggtccgacgaagatcggaaacggccaacaccta
agtatgatagagagcaattttttaggaaaggttccaattaaccattttgcctacagcgat
cacaattacgaggaacgaagaatgatcgtcagtcaagtcgacaaaactacatttaaccgt
tctggctttgtccctggagattacaattacgaaaaacgaatgaccattagtccgattggt
gatagcgctcgtgtagctggtacagacagtcataaattacagcttatgaaagcaagcttc
ttcgacgtaaatgatgaagacataaacgaggaaacaagcaatgacatattcccttctgta
caaaaaactttgataagctatttcccagatattacagaaaccaagaacgacgaagttcca
tacaacacttcgacattacgaacgactcttatcgcaaacaaagcactatctccgtgcccg
gaaaacatactttatacgtttagtagaaaatcacatttacctagtgttggtatcaaagac
aaacagttcattgagaaaactattccaccacctacgattacacctgtgacaaacgtgtta
aagtatcactatgaagttgttccgcttgaagaatctaggttgaataagttgcgatttcgt
tgcatcgccgacaccggtatatacatgggcaggacatttcgaccgagttggggtgccggt
ctgacattactatctctcagcacgcaagagcaagcaatcaagatgcaactaagaaacaca
tttagtcaattaaaccattacgtctctggtcgtctgtcggatgacgtctcatcgacagta
attgttcaacgtttacagattgtgggtggtgacgaatatgacacgaaaatgttcaaggat
agtatagaatgtcatttgagaattcaactagatcactgtgtgatgggtcatgagggagat
tgtcccacgtttgacgtaacgaccgacagtgcaaacgaagcattgcgattacattgcacg
ctagcacaggatcttgctgaaaaggaacaaagaccaagcgaggataccaatgatgaacac
atacaatgtggcagcgccgagagatcataccgtcaatacgcgagtattgtgtggactcta
tgcgtagcactttggggaaattttgttgatgaagacacaactaataacgccaatgaagaa
cactataacgtcatgatgagaagagaagccgtaggcgaatggttaaagaatgtggttcaa
aaaacgatcgaacaagaaatcaaaaatatcgacattgtaactaagaactctcacgagaaa
ataatattgtcgctgctctctgcttgtaaactggaggaagcgtgccaggaagcacggaag
gtcggagatcactgtttggcgttactgatggcacaattacgaagtggtgcgacagtcaag
aaactgattaagcaacaactcgcattatggcaggaaactgatgtggacgaaaatctcaca
attgatcgtctgaagctattcatgttggttgcgggtgaaccgcttatctccagcaaacat
ggcactattaatgtgtgcgaggatctagactggaagcgggcgtttgccattcatctatgg
tatttatcaccgccgacttcttcaatcaccgatgctttggacctctatgaagcatcgttc
aatacaacggaagctcaagcatacgcagcaattcctgaacctgaatataaagagtatgat
tacgacgccgagttaaataatggcaaacggatacacgatctctgctttcaacttttaaaa
ttgtactgcacggggaatcacgatttgggcgaacttttgaatccactgtcatataccgcc
aatcctttagattacagattaagttggttgatgcaacaaaccctcgtagctttgggttat
acgcatctctctgatcatgttgtcgcattaacacacacaaactttgcgacacaattggag
gcacatggactttggcactgggcaatattcatagtattgcacttacgagattcgtctagg
cgacgaactgctgtacaggacttgctgttacgtcacatagaaatagacgatactcctgaa
tatgtgaagcgtgaacaattcttgaaggaagagcttggtatatcattggtttggattcat
caagccaaagctatcaaaagtagcattaataagaggtatggtgaagcagcttggtactac
atccaggcggaacaatggacccaagctcatgaaattattatagagcatctggcagccgat
gctataataaatgaaaactacgaatatttaaaatcattattaagttcactagtaccaatt
gaatgtagcagcacgattagtgggtggtcgcatcaaggacaacttttgtgggaatatatg
gaaataactagcgagcttcagagcctgttaaagactcctgattactgtggactagcttat
caattagaaacgttaaaacctcgattaacaaacttatgtcacaaaattgatcaattccca
tgctcaactgctaaacataaattgtgccaagctgaaattgcgaaaagaactctacattta
gctagaaatatgctgttgatgcagaaaaatgagcagagatcaatcacgaagttattggtc
cgtttgatatctcagttacccttaccggaagattatgcacaacaagaactgcgacccgtc
gttaatatgcgtgtaacagaagtaatgccataa
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