Cyphomyrmex costatus: 108781368
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Entry
108781368 CDS
T11118
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108781368
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
108781368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
MCP1_SIFV
Motif
Other DBs
NCBI-GeneID:
108781368
NCBI-ProteinID:
XP_018404825
UniProt:
A0A195C1G6
LinkDB
All DBs
Position
Unknown
AA seq
1388 aa
AA seq
DB search
MSKPNIRKITADPTKCNTDSSRRPSVFERLGTKPAIAATAAAQNTSDYCRNWALNGSCSY
GKSCKYANTHTLISPSKRAKKDNAIAGTSGLIEDPFKRLTSKIVKKPSHSPDLNIEEWNQ
KDLEYEDEKVLEKRRQLLQRELKLQMKKDKEVHGKDKVRQKKKAMSSSSSSRTSSTSSSS
SSSSSEDSSSTSTSDSHKKIKKIKTKRHHSISADYNEDKERKKKLKLKRLGTRNDKTVNK
KKRKLDNSTKKDLTTRSIKKYAPSSVSRKHPSSLRTRSPVVQQGSTSGVTSAVTTTLGSQ
VSVAHHASSSKIRERNRSESPKAIKNNREVDKEDSRHYKKVRDVDECLSKDAVKCKSFDK
IKEQQEKEKNRAIDEKNKSDDRLRSKCKEKDVRSRTPPPPPPSSERSSKYQHVKENASSK
IQRSRTPSRRRDLTPAKNTEKQGNSSSRVRDAEKKDRDAHKRDKSKERDDARKNEQTSSG
KAKQTMTSSQDDSYRRNNTNKDNFDDKTQQKSRERQREKEVRDERPSRLTRDQRQEPQRD
KDKDESQERCRNERQRERDRDRDRDRERERERDRERDRDRERERERDRERERDREIRDRD
RDRDREREKSIKSRERDVSTVIPPATLSLSADKGSRYNNRIKERPLGKDVSFEKNSGTRE
RNRNERERERSETKALAERERNSTQSRLDGRYERNSIAEKDVSSSRGKSTVNSPRDRMDR
FRETSLDRTALHEKSGHAATSSSVQSTATLPPVKIPPASSSSSVVAVTPSLSSRDHLIDM
VDGHYDRDRHRRFGVRYERGHTSEHSSRKDQARIESNRIPSKINRIVDRRDANSPRRTME
VDRNFGRNYGRLPEQWEEQEESAPHVEYRDHAHIHEDDRRKTIEGRRFDSPFEERRVARD
ERSREKARYVIQTTERPSFDDHRHHHHHHRHPLYPGDKMRSGGASIRDETVPNDNWEGHH
RDVEHGRDRNYQAVEWEEREWRNRPLWENRDSLPRSEIHDDEWNSRYDNTINDWKPNDAR
KWDNQNVHVRSHYRNDRSKDLEHGESTQHSKRRSYNAPETREEPVIHPSAKQAAIYGSMK
EEPINKKLMELAEGRLCTTTREKSTDNFQKKNQQKDKPEIKEPVAIEPKRPIVDESLQTL
HTESDLSDISDDPDDILNMEEDATDMENNKTRINKKASDAAHRDAQSTVQEPVQLSPKEP
AEETIFSSKSKDNADTVSLKNMEDDNMETMDFEEISDGELEEDIKTSGKGLGDALGVDWE
SLVKETQARRIVPSNQDSAENRWQCKAIFYRIGISKKYAGEDFMKKLVKKYEKNDHKFLL
NDIALMHTALARNRLLRDLGNGAMHSVDDTLYRNNNANYDEDVDYDWETLKPSTALYEEA
KCLLQQVI
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccaaacataaggaaaataacggctgaccctacgaaatgtaatacagactct
tcacgacggccgagtgtgtttgagaggttgggcaccaaaccagcgatcgccgccaccgcc
gccgctcaaaatacatcggattattgcagaaattgggccctcaacggtagttgttcctac
ggaaagagttgcaaatacgcaaacacacataccttgataagtccatccaagcgtgctaag
aaagataatgcgatcgcaggtacatctgggctcattgaggatcccttcaaacggctcaca
tcaaaaattgtgaaaaagccgtcgcatagcccagatttaaatatagaagagtggaatcag
aaagatctcgagtacgaggacgagaaggtgttggagaaacggcggcaactcctacaacgg
gaattaaaattacaaatgaagaaagacaaagaagtacatggcaaagataaagtaaggcag
aagaaaaaagcgatgagctcctcctctagttcgcgcacatccagcacgtctagcagtagc
agcagctccagcagcgaagactcctcttctacgtccacgtcggactcgcataagaaaatc
aaaaaaatcaagactaaaagacatcatagtatttctgctgattacaatgaagataaagaa
agaaagaaaaaattgaaactcaagagactaggaacgagaaacgacaaaaccgtcaacaag
aagaaacgcaaactcgacaattccacaaagaaagatcttactacgagatcaatcaagaag
tatgctccgtcgtctgtatccagaaaacaccccagctcgttgcgcactagatcacctgtg
gtgcagcagggatctacgagtggagtcacgtctgcagtgaccacaacgttgggctcgcaa
gtttctgtcgcgcatcacgcatcatccagcaaaatccgggaaagaaacaggagcgaatct
ccgaaagcgataaagaataatcgagaagtggacaaggaggacagcaggcattacaagaag
gtacgtgatgtggacgagtgtctgtccaaagacgctgtcaagtgcaagtcattcgataaa
atcaaagagcaacaggagaaagaaaagaaccgcgctattgacgaaaaaaacaaatccgac
gatcggttgaggtccaagtgcaaggagaaggatgtccgttcacgtacgccgccgccaccg
ccgccatcatcggagcggtcatccaagtaccaacacgtcaaagagaatgcgtcatcaaaa
atacaacgtagtcgaacgccatcgaggagacgcgatcttaccccggcgaagaatacggag
aagcaaggcaactcgtcaagtcgcgtgagagatgcagagaaaaaagatcgcgacgcgcac
aagagagataaaagcaaagaacgagatgatgcgagaaaaaacgagcagacgtcttccggt
aaagcaaaacaaacaatgacttcgagtcaagacgacagctatcgaaggaacaacacaaat
aaggacaattttgatgataagacgcaacagaaaagccgtgagcgtcagcgtgagaaggag
gtgagagacgagcgaccctcgagattgactcgtgatcaacgccaagaacctcagcgcgac
aaggataaggatgaatctcaagagcgttgtcgaaatgaaagacagcgcgagcgtgatcgt
gatcgggatcgggatcgagaaagggaacgcgaacgcgacagagagagagatagagatcgt
gaacgagaacgggaacgtgatcgcgagcgggaaagagatcgtgaaatacgagatcgagat
cgcgatcgggaccgagaaagagagaagtctataaaatcacgagaaagggatgtgtctacg
gtaattccacccgcgacattgagcctatcggcggataagggttcacgttacaataacaga
atcaaggaaagacccctaggtaaggatgtgtcgtttgaaaagaacagcgggactcgcgaa
cgaaatagaaacgaacgtgaacgggaacgttctgaaacgaaagctctcgccgagcgtgaa
cggaactccacgcagtcacgactggatggaagatacgaaagaaatagcattgccgagaag
gacgtatcgtcaagtcgcggcaagtcgactgtcaattcacctcgggatcgcatggatcgc
tttcgggaaacgtctttagatcgtacagccttgcacgagaagagtgggcacgccgcgacg
tcgtcgagtgttcagtcaacagcgacgttaccgcccgtaaaaatacctccggcttcatct
tcctcatcagtagtagctgtgacaccctctctatcgtctcgcgatcatcttatagacatg
gtggacggtcactatgacagagataggcacagaaggttcggtgtgagatatgaacggggt
catacgtcagagcacagtagtagaaaggatcaggcacgaattgaatcgaatcgcattccg
agcaaaatcaaccggatagtggatcgtcgggatgcaaacagtccgcgacgtaccatggag
gtggacaggaactttggtaggaactacggcagattgccggagcagtgggaggagcaggag
gaatcggctccacacgttgagtatcgggatcacgctcacattcatgaggatgacagaaga
aaaactatcgagggaagaaggtttgacagtccctttgaagagagacgcgttgctcgcgac
gagagatccagagaaaaagcgagatatgtgattcaaactacagagcgaccatccttcgat
gatcatcgtcatcatcaccatcatcatcgacatcctctgtatcctggcgataagatgaga
agtggtggagctagtatcagagatgaaactgttcctaacgataattgggaaggacatcac
cgtgatgtggaacacggtcgagaccgtaattatcaggcggtagaatgggaagaaagggaa
tggcgcaatagaccattatgggaaaacagagatagtcttcctcgttcggaaatacatgac
gacgagtggaattccagatatgataatactataaacgactggaagcctaatgatgcacgg
aaatgggataatcagaacgttcacgttcgatcgcattatagaaacgatcgttcgaaggac
ttggagcacggagaatctacacaacatagcaaaagacgatcgtataatgcgccggaaaca
agagaagagccagtgattcatccttctgctaagcaagctgctatttatggtagtatgaaa
gaagaacctattaacaagaaattgatggaacttgctgaaggtagattgtgcacaactact
agagaaaagtctacggataatttccaaaagaagaatcagcaaaaagataaacccgaaatt
aaggaacctgttgcgatagaaccaaagcgtcccattgtcgatgagtctttacagaccctt
cataccgagagcgacttgagtgatatcagcgatgatcctgatgatatattgaatatggaa
gaagatgctacagatatggaaaataataagacgcgaataaataagaaagcatcggatgct
gctcatcgtgatgcgcagtcaacagtacaagagccagttcaattatctccaaaagaacct
gcagaagaaactattttcagttcaaaatccaaggataatgccgatacagtatcattgaag
aatatggaagacgataatatggagactatggactttgaagaaatttctgatggtgagtta
gaggaggacatcaaaacgagtggaaaaggactaggtgatgccttaggagtcgattgggaa
tctcttgtgaaggaaacgcaagcaaggagaatagttccgtccaatcaagactctgcggag
aatcgatggcagtgtaaagctattttttatagaatcggtatatctaagaaatatgcgggt
gaagatttcatgaaaaagctggtaaaaaagtatgagaagaatgatcataaatttttgctg
aatgatattgcgctaatgcacacagcgctcgcgcgaaatcggttacttcgagatttaggt
aacggcgcaatgcattctgtagatgatactttgtatagaaataataatgcaaattatgat
gaagatgtggactacgattgggaaacattaaagccaagtactgctttgtacgaagaagcg
aaatgtttattacagcaagtaatataa
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