Cyphomyrmex costatus: 108781550
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Entry
108781550 CDS
T11118
Name
(RefSeq) protein smoothened
KO
K06226
smoothened
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04341
Hedgehog signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04341 Hedgehog signaling pathway - fly
108781550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ccoa04030
]
108781550
G protein-coupled receptors [BR:
ccoa04030
]
Frizzled / Smoothened family
108781550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
E3_UFM1_ligase
Motif
Other DBs
NCBI-GeneID:
108781550
NCBI-ProteinID:
XP_018405051
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MKMVLLLLLYCLIFCNGLLLGLEHGFAANDNDGENSTWKDMGRHQRIKDPNYRLDRYPIG
ELSPDISACRRPAKCVQLSKSTCMGTKLPYSFTTLDLIPEHITQDIVEERLYLLQALKHV
PKCWAVVQPFLCSIFMPKCINDTVELPSQEMCKMVSGPCRMLMNHTIWPSFAKCDNKELF
PRLCQNDIRELKFNISGKCLKPLVPTDNALSIFDGVEGCGTQCYNPLYTPDEHNQIHSFI
IWAASICCAFNLFTILTFIIDWRSANKYPALVIFYINGCFMVSCIGWLIQFTPGSRDVVI
CHKDGTLRTREPSGENLSCVIVFILVYYSLMAAAVWFVILTYAWHMSFRALGTIQDRIDK
KSAYFHLIAWCIPLVLTVAIMALGRIDGNSITGICFVGYADHMAKIFVLGPVLLAVLIGG
YFLCRGLYTLICLKISSQEIISERASSKIKQTIVRMGLFSIGTLAAVVITFYCHIYEIQN
SQQWQQSFKSYMICTIATKYADVSECKMDSRPSTGKLQLHLLALFSTGIFMSSWIWTSST
VDTWCRFLRRIFNRESEEPPIRLSKHKLIAHLFANRKTFNKAGRLSISFHNTHADPVGLN
FDLNSASQDFSSTWAAALPKLVTRRGALVGTTGSVSSNRRNSADSEISYSFKCVSMESRR
NSLDSQISVQIAQVKTTRKVASRSRGRRGKSRRDFGKSRSAKIDPLSRRGSTTSQDSQLI
TQIPIQMPNMGRRFGNAGLDERALKIIDSKNTGMLLPFLLRGQSGSDENLSSEEKRQDMA
DKDVDIEVGNMEKEDKQDSDSEDSESEDEVKMLDPENAHERSKNKERSNKNCKTYNHESD
RRSREGHRSKYVLQDETILKHLLQEASDIKVKNENEKKEAYRKAVMSDSSLTSCYPELTR
LLQGDGQTNAREIATQTSLPLDILEMEELKQSIDEIINSRHCSSKGTQISPQLKKSKNIT
T
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggtacttttgctgctcctctattgtctgatattttgcaatggcttgcttttg
ggactggagcatggatttgcagctaacgacaatgatggtgaaaacagtacgtggaaggat
atgggtcggcatcaaagaatcaaagatcccaattatagattagatagatatcctataggt
gaattgtcaccagatatctcagcctgccgtagacctgccaaatgtgttcaactatctaaa
agtacctgtatgggtacaaaattaccttactcttttaccacattggatcttataccagaa
cacataactcaagatattgttgaggaaagattatacttgttgcaagctttaaagcatgta
ccaaaatgctgggcagttgttcaaccatttttgtgctcaatatttatgccgaaatgtatt
aacgatacagttgaattaccatctcaagagatgtgcaagatggtatcaggaccctgtagg
atgctgatgaatcatacaatatggccgagttttgcaaagtgtgataataaggaattattt
ccacgattatgtcagaatgatattagggaattgaaatttaatatttcgggcaaatgcttg
aaacctcttgtacctactgacaatgctctttccatttttgatggagttgaaggctgtgga
acacaatgttataacccattatacacgcctgacgaacataatcaaatacattcgttcatt
atatgggctgcaagcatctgctgtgctttcaatttattcaccattctaacatttatcata
gattggagaagcgcaaacaagtatccagctttggtaatattttatattaatggttgtttt
atggtatcttgcattggctggctaattcaattcactcctggcagtagggatgtagttata
tgccacaaagacggcacattaagaacgagagaaccaagtggggagaatctgtcgtgcgtc
attgtctttattcttgtgtactattctttaatggcagctgcagtatggttcgttatatta
acgtacgcttggcacatgagctttcgagcacttggcacaatacaagatcggatagacaaa
aagagtgcttactttcatttaatcgcttggtgcataccacttgttttaacagtcgcaatc
atggcattaggtcgaattgatggtaacagcataacaggaatttgcttcgtgggttacgcc
gatcatatggcaaagatttttgtgcttggtcctgtattacttgcagtgttaataggagga
tattttctatgcagaggactctacacgcttatttgtttaaaaataagcagtcaggagatc
atatccgaaagagcaagttcgaaaataaaacaaacaattgttagaatgggactcttttcc
ataggcactcttgcagctgttgttattacattctactgtcatatttacgaaattcagaac
tcgcagcaatggcaacaaagctttaaaagttatatgatatgtacgattgcgacaaagtat
gcagacgtatctgaatgtaaaatggactcgagacctagcacaggtaaattgcaattgcat
ttgcttgcattattttccaccggcatatttatgtcttcgtggatatggactagctcaacg
gtcgacacatggtgcagatttttaagaaggattttcaatcgcgagtctgaggagcctcct
ataagactgagtaagcacaagcttatcgcgcatttatttgcgaatcggaagacatttaat
aaggccggtcgtttatcaataagttttcacaacactcatgcggatccagttggactgaat
tttgacctcaattcagcatcacaagacttcagcagcacttgggcagccgctttgcccaaa
ttagtgacgcgaaggggtgcactagttggcactacaggctctgtgtctagtaatagacgc
aactcggctgattccgagattagttatagcttcaaatgtgtctctatggaatccagacga
aattctctggactcgcagatctctgtacaaatcgcacaagtaaagacaacacgaaaagtt
gcaagccgatcgcgcggccgtcgtgggaagagcagaagagacttcgggaaatcccgatca
gcaaaaattgatccattgtctaggagaggcagcaccacttctcaagatagtcaattaata
actcaaattccaattcaaatgcccaatatgggcagaagattcggaaatgccggactggat
gaacgagccttgaaaattatcgactctaaaaacacgggtatgcttttgccttttttgtta
agagggcagagtggcagtgacgaaaatttaagcagtgaggaaaagaggcaagatatggct
gataaggatgtcgacatagaagtaggcaacatggagaaggaagataaacaggacagcgac
agtgaggatagtgaatcggaagatgaagtaaaaatgttagatccagaaaacgcacacgag
cgtagtaaaaataaagagcgtagcaataaaaactgtaaaacttataatcatgaaagtgac
agaagaagtcgcgagggtcatagaagcaagtatgttttacaagacgaaactattttgaaa
catctacttcaggaggctagtgatattaaggtgaaaaacgaaaatgagaagaaagaggcg
tatagaaaagctgtgatgagcgattctagtcttacctcgtgttatccagagttaacgaga
ttgttgcaaggcgatggacagactaatgctagagagatagcgacgcagacttcgctgccg
ctcgatatactggagatggaagagttaaagcagagtatcgatgagataattaacagcaga
cattgtagctctaagggaactcaaatatcgccgcaattgaaaaaaagtaagaatatcacg
acgtaa
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