Cyphomyrmex costatus: 108781617
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Entry
108781617 CDS
T11118
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03018
RNA degradation
ccoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108781617
09123 Folding, sorting and degradation
03018 RNA degradation
108781617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108781617
03041 Spliceosome [BR:
ccoa03041
]
108781617
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108781617
mRNA degradation factors
5'-3' decay
Lsm complex
108781617
Spliceosome [BR:
ccoa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108781617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
108781617
NCBI-ProteinID:
XP_018405140
LinkDB
All DBs
Position
Unknown
AA seq
111 aa
AA seq
DB search
MSAPKQQQNVEHKEKKRKESILDLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNT
KEYLRDPDDPYKLNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaccgaaacagcaacagaatgttgagcacaaagagaagaaaaggaaagaaagc
attcttgatttatcaaagtatctcgagaagaatataagggtaaaatttgctggtggcaga
gaagccgaaggtatccttaaaggttatgatcctttactcaatctagtgcttgacaacaca
aaggaatatcttagagatccagatgatccatacaaattaaatcaggacactcgtatgctg
ggtttagtagtgtgcagaggaacgtctgtagtgcttatctgtcctgtagatggtatggag
tctattcagaatccgttcatacaacaagaaggataa
DBGET
integrated database retrieval system
