Cyphomyrmex costatus: 108781653
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Entry
108781653 CDS
T11118
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04120
Ubiquitin mediated proteolysis
ccoa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108781653
04120 Ubiquitin mediated proteolysis
108781653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccoa04121
]
108781653
Enzymes [BR:
ccoa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108781653
Ubiquitin system [BR:
ccoa04121
]
Ubiquitin ligases (E3)
U-box type E3
108781653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
108781653
NCBI-ProteinID:
XP_018405193
UniProt:
A0A151I7A0
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MSELSQEEMRRRRLARLEGFNNNNATASSSNTIAPTSPSTSELSKAFPGSISPSIQQQLQ
RTEIPMEVEESNDKQCNITEMDNSGIENMEVDESDRKDSIPRSRTMSSSTEVTTDHIHVV
ISRVLRISWKSSIEGTIFLPQTAAYTLKQRQMDFSEIINQALMEILCMFSKGEDLLNDIT
VDVSSDRQDSPNNQASPLLSPVVALPSYQLPTMPLPIGSKSSQPKSLTYLLNCYSRVAIE
ERNHPKRSSIPPLSDVLTVLKTQCVQYSSLVLQGLVGICEASVIPMCTTYLLYPILSQSL
PRGYLHELVAKTHTNSSTFNKIFTPVLQGLYLSMQQASLVGNTHRRPIEALEELIEIRCG
PSGNIRPICRLITNQVQFLPDIMTSAAGRELTRTSFLGPFLSVSVFAEEQPKVAEKFFSG
NPVTDKSVNLSLQQELESTRTSLHKMFHAILANSNCRDATLTYLAALLRHNEKRAQIQTE
EFSLAGDGFMLNLLSVLQMLSVKIKLDTVDPLYPFHPSSFVEIKNDTKLKLTSQEVAEWQ
KHLEKTHKWTESKFPTQCWFLTLHCHHIALLPALQKYQRKLRALRDLQKMLDELQATEPQ
WKDSPFAEHNRDLIKQWKQQLKRLIKSKSCADAGLIDPVFLRRCLHFYISVAEVLLSLLT
QTAPGNPLPKLPLPQEVTCKFTALPEWYVEDIAEFLLFTLQFCPGVVASNMDNSLITWLL
VVVCTPHCIRNPYLIAKIIEVLFVINPSVQGRTETLHDKVMAHPISKTLLASYLMKFYTD
VETTGSSSEFYDKFSIRYHISLILKSMWDSPVHRASIVNESNNGKQFVKFINMLMNDTTF
LLDESLESLKRIHEVQELMSDTSAWSALSQEQQQSRTRQLAADERQARSYLTLAKETVAM
FHYLTVDIKEPFLRPELVGRLCAMLNFNLQQLCGPKCKNLRVRKPHKYGWQPRTLLSQLV
DIYLHLDCDNFAAALASDERSFCKELFTDAASRLERSAIKTTTEIERFIALAERAAIIAR
DNRARDADYGDAPEEFRDPLMDTLMEDPVKLPSGIVMDKAVIIRHLLNSATDPFSRQPLS
EDMLTPMLDLKERISVWKQQKKRSTNI
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctcagccaggaagaaatgagaagaaggcggttagcccgattagagggcttc
aataataataatgcaactgccagttcatctaatactattgctccaacttctccgagcact
tcggagctatcaaaagcattcccaggatcaatatctccgtctattcaacaacaattacag
cgtactgagataccgatggaagtagaagagagcaacgataaacaatgtaatattactgaa
atggataattcaggaattgaaaacatggaggtcgatgaatcagataggaaagattcaata
ccacgatcgcgtacgatgagttctagcacagaagttacaacggatcacatacatgttgtc
atatcacgcgtcttgcgcatatcgtggaaaagctccattgaaggaactatattcttacca
caaacagcagcgtacacgctgaaacagagacaaatggattttagtgaaattatcaaccag
gccttgatggagattttgtgcatgttctcgaaaggggaagatctcttgaacgacatcacg
gtagatgtgtcgtccgatagacaggacagcccaaataaccaagcaagtcctctactaagt
cctgtcgtggctcttccgtcttatcaattaccgactatgccattacccataggcagcaaa
tcgtcacaaccaaaaagtttaacttacttattaaactgttattcaagagtcgcaatagag
gaaagaaatcacccaaagcgatccagcatacctccgctttccgatgtactgacggttttg
aaaacgcaatgtgttcagtactccagccttgttcttcaaggattggttggcatttgtgaa
gcttcagttattcctatgtgtaccacttaccttctctatccaatactgtcgcaaagtttg
cctcgaggctaccttcatgaactcgtggctaagacacacacaaactcaagcacgttcaat
aagatattcaccccagtcttacaaggcctgtatctctcaatgcaacaggcgagcttggtc
ggcaatacacatagaaggccgatcgaggcgctagaggaactgatagaaattcgttgtggt
ccaagcggcaacatacgtccgatatgccgtctgattacaaatcaagtgcaattcttgccc
gacattatgacatcagccgccggcagagaacttacgaggacttcgtttttgggaccgttt
ctttcagtgtcggtatttgctgaagaacaaccgaaagtggctgagaaatttttcagtgga
aatcccgtcacggacaaatcggtgaatttatctttgcagcaagagttggaaagtactaga
acttcgttgcacaagatgtttcacgcgatacttgcaaacagcaattgccgcgatgctact
ttaacgtacttagccgcgctattgcgccacaatgagaaacgcgcgcaaatacaaaccgag
gagttctctctggccggagatggatttatgttgaatctattgtcggtcttgcaaatgctc
tctgtaaaaatcaaactggacaccgtagaccctctgtatccatttcatccctccagcttt
gttgagataaagaacgacacaaaactgaaacttacctcccaggaagtcgcggaatggcaa
aaacatctggagaagacgcataagtggacggaatcgaaatttcctactcagtgttggttc
ttgacgttgcattgccatcatatcgcgctactaccggcattgcaaaagtatcaaagaaaa
ttgcgagcgttacgcgacttacaaaagatgctcgacgaactgcaagccacggaaccccag
tggaaggatagccctttcgctgaacataacagagacttgattaagcaatggaagcagcag
ttgaagcgattaattaaatccaaatcatgcgcggatgcaggtctgatagaccctgtcttc
ttaagaagatgcttacacttttatatatctgttgccgaggttttgttgagtcttctgaca
cagactgctccgggtaatcctctccctaaacttccacttcctcaggaagtcacatgcaag
tttaccgcattaccggaatggtacgtggaggatatagcggaattcttgttattcaccctc
caattctgtcctggagtagtggcaagtaatatggataattcgcttatcacgtggctacta
gtcgtcgtatgtacaccacattgtatacgaaatccgtatttaatcgcaaaaatcattgag
gtcctctttgtgataaatcctagtgttcagggaagaacggagactctccacgataaagtt
atggcacatcctatatccaagacacttttggcgtcgtatctcatgaagttttataccgac
gttgaaaccactggctctagttccgagttttatgacaagttttcaatacgttatcacata
agtctaatcttgaaatcaatgtgggatagtccggtacatcgagcgtctatcgtcaatgaa
agcaataatggcaagcaatttgtcaaatttatcaacatgttgatgaacgacactaccttt
ctacttgacgagagtttagaatctctgaagcgcatacacgaagtgcaggaacttatgtcg
gacactagcgcgtggagcgcactctcccaagagcaacaacaatcaaggacgaggcagctg
gcagcagacgagagacaagctaggtcttatcttaccctagctaaggaaacagttgccatg
ttccattatctaacggtcgatattaaggagccgttcctgcgaccggaattagtcggacga
ttgtgtgccatgctaaatttcaatttgcaacaattgtgcggacctaagtgcaaaaatctg
agagtgagaaaaccacataaatatgggtggcaaccacggacgttacttagccaattggtt
gatatatatttgcatcttgactgtgataatttcgcggccgctttagccagtgacgaacgt
tcgttctgtaaggaattattcacggacgctgcaagcaggctagaaagatctgcgatcaaa
actaccacggaaattgaaagatttatagctcttgcggaacgtgcggcgataatcgcgaga
gataatcgcgcgcgtgacgcagactatggtgacgctcccgaggaattccgagatccattg
atggatactctgatggaagatccagttaaactaccatctggtattgttatggacaaagca
gtcatcataagacatttactgaatagtgctacggatcctttcagtcggcaaccacttagc
gaagacatgctcacaccaatgcttgacttaaaagaaaggatatctgtatggaagcaacaa
aagaaaagatcgacgaatatataa
DBGET
integrated database retrieval system
