Cyphomyrmex costatus: 108781855
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Entry
108781855 CDS
T11118
Name
(RefSeq) Y-box factor homolog isoform X1
KO
K09276
Y-box-binding protein 1
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoa03000
]
108781855
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108781855
03041 Spliceosome [BR:
ccoa03041
]
108781855
Transcription factors [BR:
ccoa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
108781855
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108781855
mRNA cycle factors
Common to processing body (P body) and stress granule
108781855
Spliceosome [BR:
ccoa03041
]
Common components
Common spliceosomal components
General mRNP proteins
108781855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
Motif
Other DBs
NCBI-GeneID:
108781855
NCBI-ProteinID:
XP_018405467
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MGETEKQPEQPKAIQQKMVIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIIKNN
PRKAVRSVGDGEVVEFDVVIGEKGHEAANVTGPAGEAVKGSPYAADRRRGYRGIHWVYPR
RGNGRPQNRRSREGQEGYEQGEGKVGDDANAEGGGQPQQQQRRYRLRRHYDGYYRGGRRS
GPNPSQQQGDAGEGGEQAEGTGGEGGAPPRGGGRGRGGPSRRYFRRNFRGGRGGGPPRRP
RSQDGQVTDDEAVGESAQLSNSRRNPQPRYRRRLVRRPRATSSQQTNTIESLSSAETKRK
SSNSASSPVTFLQTQVTDIPSESCDKSPKSEQKSDAPKDSDAPAAAPAPQESQPVQNTTT
ESTV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagacggagaaacagcccgaacaacccaaggctatccagcagaagatggtcatc
gctaacaaagtgaccggaactgtgaaatggttcaatgtcaagagtggctacggtttcatt
aatagaaacgataccaaggaagatgtgttcgtccatcagtcggccatcatcaagaacaac
ccgagaaaggctgtacgtagtgtgggagatggtgaggtcgtcgagtttgacgttgttatc
ggcgagaagggtcacgaggcagccaatgtcactggcccagcaggtgaagcagtaaaaggt
tcaccctatgccgcggacaggcgtcgcggatatcgtggtattcactgggtatatcctaga
cgtggcaatggtcgaccgcagaatcgtagatcacgtgaaggccaagagggttacgaacaa
ggagaaggaaaggtcggcgatgacgcaaacgccgagggaggcggccagccacagcagcaa
cagcgtcgctataggctgcgtcgtcattatgatggttattaccgcggaggacggcgttcc
gggcccaatccatcacaacagcaaggagatgctggcgaaggtggtgagcaagcggaagga
accggcggcgaaggtggagccccgccacgcggtggtggtcgtggacgcggtggtccatca
cgacgttacttccgccgcaatttccgcggaggaagaggtggtggtccgccacgacgtcct
cgcagtcaggatggccaggtgaccgatgacgaggctgttggcgagagcgcacaactcagt
aattcgcggagaaatccacaaccacgttacagacgacgattagtacgacgacctcgtgcg
acgtcgagccaacagacgaacactatagagagcttgtcatctgcggagacaaaacgcaaa
tcctccaattccgcttcctctcccgttacgtttcttcaaacacaggttaccgatatccct
tccgaatcctgcgataaatccccaaagtcggagcagaagtctgatgcacctaaagattcg
gatgcacctgccgctgcccctgctccacaggagagccagccggtgcagaacaccaccacc
gaaagcaccgtctaa
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integrated database retrieval system