KEGG   Cyphomyrmex costatus: 108781911
Entry
108781911         CDS       T11118                                 
Name
(RefSeq) polyubiquitin isoform X1
  KO
K08770  ubiquitin B/C
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa04120  Ubiquitin mediated proteolysis
ccoa04137  Mitophagy - animal
ccoa04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108781911
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108781911
   04137 Mitophagy - animal
    108781911
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccoa04121]
    108781911
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccoa04147]
    108781911
Ubiquitin system [BR:ccoa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108781911
Exosome [BR:ccoa04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   108781911
  Exosomal proteins of other body fluids (saliva and urine)
   108781911
  Exosomal proteins of colorectal cancer cells
   108781911
  Exosomal proteins of bladder cancer cells
   108781911
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 UBL_UBAC1
Other DBs
NCBI-GeneID: 108781911
NCBI-ProteinID: XP_018405530
LinkDB
Position
Unknown
AA seq 621 aa
MQAAVISSQSTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ
LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK
EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV
EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF
AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK
IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS
DYNIQKESTLHLVLRLRGGNV
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgcaagcagctgtgatctccagccagagcaccatgcagattttcgtgaagacgttgacc
gggaagaccataactctggaagtcgaggcttctgataccattgagaacgtaaaagcaaag
atccaagataaggaaggcatcccacctgatcagcagcgtttgatcttcgccggaaagcaa
cttgaagacggtcgtactctctctgattataacattcaaaaagaatcaaccttacatttg
gttcttcgtctacgtggtggaatgcaaatctttgtcaaaaccctgacgggaaaaactatc
acgttggaagttgaggcatcagatacgatcgaaaacgtcaaagccaaaattcaggacaag
gaaggcatcccacctgatcagcagcgtttgatcttcgccggaaagcaacttgaagacggc
cgtactctctctgattataacattcaaaaagaatcgaccttacatttggttcttcgtcta
cgtggtggaatgcaaatctttgtcaaaaccctgacgggaaaaactatcacgttggaagtt
gaggcatcagatacgatcgaaaatgtcaaagcaaaaattcaagacaaggaaggaatccct
ccagatcagcagagattaattttcgccggaaaacagcttgaagacggccgcacactttct
gactacaacatccagaaggaatcgacattgcatttggttctccgtttacgtggtggtatg
caaatttttgtcaaaacgctcaccggcaaaacaatcactctggaagttgaggcatccgac
acgattgaaaacgtgaaagctaaaattcaagacaaagaaggaatccctccagatcagcag
agattaattttcgccggaaaacagcttgaagacggccgcacactttctgactacaacatc
cagaaggaatcgacattgcatttggttctccgtttacgtggtggtatgcaaatttttgtc
aaaacgctcaccggcaaaacaatcactctggaagttgaggcatccgacacgattgaaaac
gtgaaagctaaaattcaagacaaagaaggaatccctccagatcagcagagattaattttc
gccggaaaacagcttgaagacggccgcacactttctgactacaacatccagaaggaatcg
acattgcatttggttctccgtttacgtggtggtatgcaaatttttgtcaaaacgctcacc
ggcaaaacaatcactctggaagttgaggcatccgacacgattgaaaacgtgaaagctaaa
attcaagacaaagaaggaatccctccagatcagcagagattaattttcgccggaaaacag
cttgaagacggccgcacactttctgactacaacatccagaaggaatctacattgcatttg
gttctccgtttacgtggtggtatgcaaatttttgtcaaaacactcaccggcaaaacaatc
actctggaagtcgaagcatcggacacgattgaaaacgtgaaagctaaaattcaggacaaa
gaaggaatccctccagatcagcagagattgatctttgccggaaaacagcttgaagacggc
cgcacgctttctgattataacattcagaaggaatctaccctgcatttggttttgagactt
cgcggtggtatgcagattttcgtcaagactctcactggtaaaactatcacattggaggtc
gaagcgtctgacacgatcgagaacgtgaaagcgaaaattcaagataaagaaggcattcct
cccgatcaacaaagactgattttcgcgggcaaacagctggaggatggacggactttgtcc
gactacaatattcaaaaagaatctacacttcaccttgtacttcgacttagaggcggaaat
gtctga

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