KEGG   Cyphomyrmex costatus: 108781911
Entry
108781911         CDS       T11118                                 
Name
(RefSeq) polyubiquitin isoform X1
  KO
K08770  ubiquitin C
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa04120  Ubiquitin mediated proteolysis
ccoa04137  Mitophagy - animal
ccoa04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108781911
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108781911
   04137 Mitophagy - animal
    108781911
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccoa04121]
    108781911
Ubiquitin system [BR:ccoa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108781911
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 UBL_UBAC1
Other DBs
NCBI-GeneID: 108781911
NCBI-ProteinID: XP_018405530
LinkDB
Position
Unknown
AA seq 621 aa
MQAAVISSQSTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ
LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK
EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV
EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF
AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK
IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS
DYNIQKESTLHLVLRLRGGNV
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgcaagcagctgtgatctccagccagagcaccatgcagattttcgtgaagacgttgacc
gggaagaccataactctggaagtcgaggcttctgataccattgagaacgtaaaagcaaag
atccaagataaggaaggcatcccacctgatcagcagcgtttgatcttcgccggaaagcaa
cttgaagacggtcgtactctctctgattataacattcaaaaagaatcaaccttacatttg
gttcttcgtctacgtggtggaatgcaaatctttgtcaaaaccctgacgggaaaaactatc
acgttggaagttgaggcatcagatacgatcgaaaacgtcaaagccaaaattcaggacaag
gaaggcatcccacctgatcagcagcgtttgatcttcgccggaaagcaacttgaagacggc
cgtactctctctgattataacattcaaaaagaatcgaccttacatttggttcttcgtcta
cgtggtggaatgcaaatctttgtcaaaaccctgacgggaaaaactatcacgttggaagtt
gaggcatcagatacgatcgaaaatgtcaaagcaaaaattcaagacaaggaaggaatccct
ccagatcagcagagattaattttcgccggaaaacagcttgaagacggccgcacactttct
gactacaacatccagaaggaatcgacattgcatttggttctccgtttacgtggtggtatg
caaatttttgtcaaaacgctcaccggcaaaacaatcactctggaagttgaggcatccgac
acgattgaaaacgtgaaagctaaaattcaagacaaagaaggaatccctccagatcagcag
agattaattttcgccggaaaacagcttgaagacggccgcacactttctgactacaacatc
cagaaggaatcgacattgcatttggttctccgtttacgtggtggtatgcaaatttttgtc
aaaacgctcaccggcaaaacaatcactctggaagttgaggcatccgacacgattgaaaac
gtgaaagctaaaattcaagacaaagaaggaatccctccagatcagcagagattaattttc
gccggaaaacagcttgaagacggccgcacactttctgactacaacatccagaaggaatcg
acattgcatttggttctccgtttacgtggtggtatgcaaatttttgtcaaaacgctcacc
ggcaaaacaatcactctggaagttgaggcatccgacacgattgaaaacgtgaaagctaaa
attcaagacaaagaaggaatccctccagatcagcagagattaattttcgccggaaaacag
cttgaagacggccgcacactttctgactacaacatccagaaggaatctacattgcatttg
gttctccgtttacgtggtggtatgcaaatttttgtcaaaacactcaccggcaaaacaatc
actctggaagtcgaagcatcggacacgattgaaaacgtgaaagctaaaattcaggacaaa
gaaggaatccctccagatcagcagagattgatctttgccggaaaacagcttgaagacggc
cgcacgctttctgattataacattcagaaggaatctaccctgcatttggttttgagactt
cgcggtggtatgcagattttcgtcaagactctcactggtaaaactatcacattggaggtc
gaagcgtctgacacgatcgagaacgtgaaagcgaaaattcaagataaagaaggcattcct
cccgatcaacaaagactgattttcgcgggcaaacagctggaggatggacggactttgtcc
gactacaatattcaaaaagaatctacacttcaccttgtacttcgacttagaggcggaaat
gtctga

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