Cyphomyrmex costatus: 108782074
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Entry
108782074 CDS
T11118
Name
(RefSeq) cytoplasmic FMR1-interacting protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108782074
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108782074
Factors involved in mRNA localization
Other mRNA localization factors
108782074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
SLED
Motif
Other DBs
NCBI-GeneID:
108782074
NCBI-ProteinID:
XP_018405732
UniProt:
A0A195BYR5
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MTTEKVTLGDALSNVDVLDEFTLPDEQPCIEAQPCSVVYQANFDTNFEDRNGFVTGIAKY
IEEATVHASLNELLEEGLEHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLAPEV
NKLLNFMYFQRKAIERFSGEVKRLCHHEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKS
SVKNDYSTYRRAAQFLKVMSDSQTLQESQNLSMFLATQNKIRDTVKENLEKIAGYEELLA
DVVNICVHMFETKMYLTPNEKHMLVKVMGFGLFLMDSELCNINKLDQKKKLKLDRIDRIF
KNLEVVPLFGDMQIAPFNYIKRSKHFDASKWPLSASSNSISPQADLMVHLPQIREDHVKY
ISELARYSNEVITTYKECRSDTENRDTAELALRGLQLLSQWTSVVTELYSWKLLHPTDHH
MNKECPQEAEEYERATRYNYSDEEKFALIEVIAMIKGLQVLMARIETVFIDAIRRNIYAE
LQDFVQLALREPLRKAIKNKKDLIRSIIVSVRETCADWHFGVEPLGDPALKGKKDPDNGF
GIKVPRRNVGPSSTQLYMVRTMLESLIADKSGGKRTLRKDIDGQYLVQIDQFHKTSFYWS
YLLNFSESLQNCCDLSQLWYREFYLEMTMGRKIQKCQVRHQHNEECSDLITMEKRIQFPI
EMSMPWILTDHILRSKEPSMMEYVLYPLDLYNDSALYALTIFRKQFLYDEVEAEVNLCFD
QFVYKLSEQIFAHYKQLAASILLDKRFRVECVALGAYLLPYPRANRYETLLKQRHVQLLG
RSIDLNKLITQRINADMQKSLDLAISKFESGDITGVVELDGLLQVNRLTHKLLSKWLALD
EYDAMFREANHNVLAPYGRITLHVFWELNYDFLPNYCYNAATNRFVKCRGLQFVQPVHRD
KPPQMSHHYLWGSKQLNLAYSTQYGQYTGFVGPHHFRTICKLLGYQGIAVVMEELLKIVK
TLIQGSLHQFTKTLMEAMPKVCKLPRYDYGSPGVLGYYHAQLNDIVQYPDAKTELFHNFR
EFGNTILFCLLMEQALSQEEVCDLLHAAPFQNILPRPYCKEGEKPETKQKRLEAKYAALQ
IVPNVDKLGTAKQAMIAREGDLLTRERLCCGLSIFEVVLSRLRSFLDDPIWVGPPPVNGV
MNVDECTEFHRLWSALQFVYCIPVGDTEFTVEELFGEGLHWAGCAMIVLLGQQRRFEALD
FCYHILRVQRVDGKDENVKGIHLKRMVDRIRRFQVLNSQIFAVLNKYLKSGDSDAASVEH
VRCFQPPIHPSLAHAQQHYHAPEYLRQINHQ
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgagaaagtcactctgggcgacgctctgtcaaatgttgacgtgcttgacgag
ttcacgctgccggacgaacaaccctgtatagaggctcaaccttgttctgttgtgtaccaa
gccaactttgacaccaatttcgaggacagaaatggctttgtgacgggtattgccaagtat
atagaagaggcgactgtacacgcgagtctaaacgagttgctggaagaaggcttggaacat
gctgttatgttatatacttggagatgctgctcacgtgcaattccacagccaaaatctaat
gagcagccaaaccgagtggaaatctatgagaaaacagttgaagtgttagcacctgaagtg
aacaaattgctgaatttcatgtattttcaaagaaaagcaattgagcgattttcaggagag
gttaaacgattgtgtcatcacgagaaaagaaaagattttgtatctgaggcatacttgtta
accttaggaaaattcatcaacatgtttgctgtactggacgaattgaaaaacatgaaatct
agcgtaaagaatgactattccacatatagaagagctgcacagtttttaaaagtgatgtcg
gactcacagacactgcaagaatctcaaaatctgtcaatgtttttagcaacgcaaaataaa
atccgtgatacagttaaagagaatcttgaaaagattgcaggatatgaggaattactcgca
gatgtagtcaatatctgtgttcatatgtttgaaactaaaatgtaccttacgcctaacgag
aagcacatgctggtgaaagtaatgggctttggtttattcttaatggacagcgaactatgt
aacatcaataaacttgaccaaaagaaaaaattgaaattggatagaattgatagaatcttt
aagaatttggaagtagtaccattgtttggagatatgcaaattgcaccatttaactatatt
aaacgttcaaaacactttgacgcttcaaaatggccactgtctgcgtcgtcaaatagcata
agcccgcaagctgatcttatggtacatcttcctcaaattagagaagatcacgtaaagtat
atcagtgaattggcaagatatagtaacgaagtcattacaacgtacaaagaatgccgaagt
gatacagaaaatcgagatactgcggaactggcattacgtgggttacaattactttcgcaa
tggactagtgttgtaacagagctatacagttggaaactactgcatcccactgaccatcac
atgaacaaagaatgtccgcaagaggctgaagaatatgaaagagctacacgatataactat
tctgacgaagagaaatttgcccttatagaagttatagcgatgattaaaggattgcaagta
ttaatggcacgaatagagactgtttttattgacgctatacgtaggaatatatatgctgag
ttacaagattttgtacaacttgcattgcgtgaaccgttaaggaaagctattaaaaataaa
aaagatttaattcgaagtataattgtatccgttagagaaacttgtgcggattggcatttt
ggagtagaaccgctcggagatcctgctttaaaaggcaaaaaagatccagacaatgggttc
ggcattaaagtcccgcgaagaaatgttggaccgtcttccacacaattatatatggtgcga
accatgttggagtcgttaatagccgataaaagcggtgggaaacgcactctgaggaaagac
atcgatggtcaatatctcgttcaaattgatcagttccataaaaccagtttttactggagt
tatcttctaaatttcagtgaatctctccaaaattgttgtgacttgtcgcaactatggtac
agagaattttatctggaaatgacaatgggtagaaaaatacagaaatgccaagtacgtcat
cagcataacgaggagtgcagcgacctaatcaccatggagaaacgcatccagtttcccatt
gaaatgtctatgccatggatattgactgatcatatattaagaagcaaagaaccgtcaatg
atggaatatgtcttatatcctctggatttatataatgacagcgccttatacgcattgacg
atatttcgcaaacaatttctatacgatgaagtggaagccgaagtgaatctatgcttcgat
caatttgtttacaaacttagtgaacaaattttcgcgcattataagcaactagcagccagt
attctattggacaaacgatttagagtagaatgtgtagctcttggagcatatttacttcca
tatccccgcgctaatagatacgaaacgttgttaaaacagaggcatgttcagctattggga
agaagtattgacttaaataaacttataacacaacgcattaatgcagacatgcaaaaatca
ttagatttggccattagtaaattcgaatccggcgatataactggagtcgtggagttagat
ggattgttgcaagtcaatcgccttacacataaacttctaagtaagtggctcgcgttagac
gaatatgatgctatgtttagagaagcgaatcacaatgttctagccccatacggaagaatt
actcttcatgtattctgggaattgaattatgactttttaccaaattattgttacaacgcc
gccacaaacagattcgtcaagtgtcgtggtctacaatttgttcaacccgttcatagagat
aaaccgcctcaaatgtcgcatcattatctctggggtagtaaacagttaaatctggcttat
agcactcaatatgggcaatatacgggatttgtcggtccgcatcattttcgtacaatatgt
aaacttcttggatatcaaggaatagctgtggttatggaagaacttttgaagatcgttaag
accttgattcaaggaagcctgcatcaatttacgaagactttgatggaagccatgcctaaa
gtctgcaagcttccacgatatgattacggatctcctggagttttaggctattatcacgct
cagttgaacgacattgtgcaatatccagacgctaagactgaactgtttcataattttcgc
gaatttggcaatacaattctattttgtctcttaatggaacaagctctatcgcaagaagaa
gtgtgcgatttgctacacgcagcgccgtttcaaaacattctgccgagaccttactgcaaa
gagggagagaaacccgaaacgaaacagaaacggttagaagcgaagtatgcggctttacaa
attgttccaaacgtagataaattaggtactgctaagcaagcgatgattgccagagaagga
gatttattgacacgcgaacgattatgctgcggtttgtcgatattcgaagttgtgctcagc
agattacggagttttttagacgaccctatctgggtcgggccaccaccagtaaatggtgta
atgaatgtggacgaatgcacagaattccacaggctttggagtgcgcttcaatttgtatac
tgtattcccgttggtgatactgaatttaccgttgaagaattatttggtgaaggtttacat
tgggctggatgtgctatgattgtccttttgggccaacaacgtaggtttgaagcacttgat
ttctgctatcacattcttcgagtgcaacgtgtggatggcaaagacgagaatgttaaagga
atacatttaaagaggatggtagatcggatcaggcgatttcaagtattaaactcgcagata
tttgctgtgttgaataaatatttgaaaagcggagacagcgacgcggcaagcgtggaacat
gtgcgctgttttcaacctccgatacatccttcactggctcacgcgcaacagcattatcat
gcacctgaatatttacgccagattaatcatcagtaa
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