Cyphomyrmex costatus: 108782114
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Entry
108782114 CDS
T11118
Name
(RefSeq) transcriptional regulator ATRX homolog
KO
K10779
transcriptional regulator ATRX
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoa03000
]
108782114
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108782114
Transcription factors [BR:
ccoa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108782114
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108782114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWI2_SNF2
DEAD
Motif
Other DBs
NCBI-GeneID:
108782114
NCBI-ProteinID:
XP_018405786
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MIQHDPMPSMISDSDESDSFEFKKKNKRKTMRRIFSSDSETSENVDLNNSFKASNIQNLN
NSNSTRKEKKKLKRKRNDSSSTDSSLVKKPKLREKRKQIKKMAFNFDNNNEEMDLQRGGR
KNIRKVLKATQVTKDTKLVAKEEQKRLKRIVKRQALYNKMYEMELDKEEKVDKLVLDFDT
KTKQELVIVHDELVKHLKPHQAQGIKFMWDACFESLERVKTTSGSGCILAHCMGLGKTLQ
MIALTHTLLTHETNIKTVLIVCPLNTVLNWLNEYEIWLKDLNDIEVYELTNFKKNVERRN
ELQRWQKTGGVMIIGYQMFRILTNSNKKIRKNMKNVMLECLVDPGADLIVCDEGHVLKND
DTALSKCIKNVKTLRRIVLTGTPLQNNLIEYHCMMQFVKPNLLGTKKEFLNRFVNPIQNG
QFDDSTTSDVKLMKQRAHVLHKILEGSVQRFDYSILTPFLPPKQEYVIFVRLTDTQIKMY
QYYLHNLAKFRSGQIVRRFFTDFQALQRIWTHPLALRLNTEKIEKANEKKELEFVSESEG
SFNIDDDSMDTENTNNTDTESTSNSDLSNDNDIQASDDKKNNENIPRRRTRNNPGKETEE
SEQDTREVVTEWWSQFVQPEHFEDMRVSAKLLLLFGILKECEQIGDKVLVFSQSLYSLTL
IEEFLRKINDQTQNGASCDTLDNHIGSWSLGLDYFRLDGQTSAKNRDIWCKIFNSPTNMR
ARLFLISTRAGGLGINLIAANRVIVFDASWNPSHDVQSIFRMYRFGQKKPCYVYRFLATG
TMEEKIYNRQVVKLSLSCRVVDEQQIERHYTNQNLNEFYMFEGYDKKKPILNLPNDRLLA
EIFLKFKDIVENYHEHDSLLENKAEEELNEEERKQAWLEYEEEKKRKSLTNSIMNTASLN
EDNTLLQQCLMMNFLNSNTPENKFKHENRQQPIHKEHISQLSKSLLEQSINADKSAQPVQ
LSGAQTGNLFSNVFTN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcatgaccccatgccctccatgatcagcgattccgatgaaagtgattctttc
gagtttaaaaagaaaaacaagaggaagaccatgcgaagaatctttagttcagattcagaa
acgtcagaaaatgtagatcttaataactcttttaaagcttcaaatatacaaaatttaaac
aattcaaacagcacgagaaaagaaaagaagaaattgaaacgaaagagaaatgattcatca
agtacagattcttcgcttgtaaagaaaccaaaattgagagagaaacgaaagcaaatcaag
aaaatggcatttaatttcgacaataataatgaagaaatggacttgcaaagaggtggtcga
aaaaatatacgaaaagttttaaaagccacgcaagttacaaaagatacaaaactagttgct
aaagaagaacagaagaggcttaaacgtatcgttaaacgtcaagctctgtacaataagatg
tatgagatggaacttgacaaagaagagaaagtggataagctcgttttagatttcgataca
aaaacgaaacaagagctcgttatcgtgcatgacgaattggtgaagcatctgaaaccacat
caagcgcaaggcattaaatttatgtgggacgcttgtttcgagtctctagaaagagtgaag
actacatccggatctggatgtatactcgcgcactgcatgggtttgggcaaaacgttgcag
atgatcgctctgactcatacacttctcactcacgaaacaaacatcaagacagtactgata
gtttgcccattaaacacagtacttaattggctaaatgaatacgaaatatggctgaaggat
ttgaatgatatcgaagtgtacgaattaacaaattttaagaagaatgttgagaggcgaaat
gaactgcaaagatggcaaaaaaccggaggtgttatgatcattggttatcaaatgttccgt
attcttacgaattcaaataaaaagatccggaaaaatatgaagaatgtaatgttggaatgc
ttagttgatccaggtgctgatcttattgtctgtgatgaaggccatgtattaaaaaatgat
gatactgctttaagtaaatgcataaaaaacgtgaaaacattgagacgcatagtacttact
gggacaccactacagaataacttaatagaatatcattgtatgatgcaatttgtaaaaccc
aatttgctaggtacaaagaaagaatttttaaacagatttgtaaatcctatacaaaacggt
cagttcgacgattctaccacttctgatgttaaattaatgaaacaacgtgcgcatgtattg
cacaaaatattagagggtagcgtacagagatttgattactccattcttacaccgtttctg
ccgcccaaacaagaatatgttatttttgtcagactgacagatacgcaaattaaaatgtat
caatattatttacataatctcgccaaatttagatctggtcaaatagttcgacgattcttt
actgattttcaagcattacaaagaatctggacgcatcccttagctctacgtctaaataca
gagaaaatagaaaaagcaaatgagaaaaaagagcttgaatttgtcagcgaatcagagggt
tcgttcaacatagatgacgattctatggatactgagaataccaacaatactgatacagag
agtaccagcaatagcgatttgagcaatgacaatgacattcaggcgagcgatgataaaaaa
aataatgaaaatattcctagacgtagaacaagaaataatcctggcaaagagacagaggaa
tcggagcaagacactcgagaagtggtcacagaatggtggtcacagtttgtacaacctgag
cattttgaagacatgagagtgtcagctaaattattacttctcttcggaattctaaaagaa
tgtgaacagatcggtgataaagtgctcgtattctcgcaatctctatattctctcacctta
atcgaggaatttttaagaaaaataaatgatcagactcaaaacggtgcatcctgtgatacc
ctcgataatcatatcggaagttggtccttaggactcgattacttccgattagatggtcaa
acttcagctaaaaatcgagatatatggtgtaaaatctttaacagccccaccaatatgaga
gcgagattgtttctcatatccacacgtgctggaggattgggaataaacttaattgcagcg
aacagagtgattgtattcgatgctagttggaatccctctcatgacgtacaaagcatattt
cggatgtatagatttggacaaaaaaagccgtgctatgtatatcgatttctcgctacggga
acgatggaggaaaagatttacaatcgtcaagttgtgaaactctcgctttcctgtcgtgtc
gttgatgaacaacagattgaacggcattacaccaatcagaatttaaacgagttttatatg
tttgagggatatgataaaaaaaaacctatattaaatttacctaatgatagactactagca
gagatatttctaaagttcaaggatatcgtggaaaattatcacgagcatgactctctattg
gagaacaaggctgaagaagaattaaacgaagaggaacgcaaacaagcttggttagaatat
gaagaggaaaagaagaggaaatcgttaacaaattcgataatgaatacagcttcattgaat
gaagacaatacgcttctacagcaatgtttgatgatgaactttttaaattctaacacgcct
gaaaataagtttaaacatgaaaatcgccaacagcctattcataaagaacatatttcacag
ttgagtaaatcgcttttggagcaatcaataaacgcggataaatctgcacaacctgtgcaa
ctaagcggtgcacagactggaaatttattttcaaatgtatttacaaattga
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integrated database retrieval system
