Cyphomyrmex costatus: 108782236
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Entry
108782236 CDS
T11118
Name
(RefSeq) LIM homeobox transcription factor 1-beta-like
KO
K09371
LIM homeobox transcription factor 1
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoa03000
]
108782236
Transcription factors [BR:
ccoa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
108782236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108782236
NCBI-ProteinID:
XP_018405960
UniProt:
A0A195D550
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MLEFYPPAPGSFNRQSEPGQPLPTVPPIPFRPTTDNNNAEPSVSVKTESGLLETICAGCG
RTIADKYVMRVGERNYHEECLLCTACGAMLSHSCFIRDLKLYCRSDYERIFGVKCARCME
KISCSDLVMRPVSGLIFHVECFACCMCGQPLPRGAHYILRQGQPICRRDFEHELFLNSPQ
DDDLLDENRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKDTGLSVRV
VQVWFQNQRAKMKKLQRKAKTEPGSDKEPKEERRTESPHSDHSHYLNALNMRDGESSSFP
SATQPLNPNNPYSPDDAYPGHSGESFCSSDLSLDGTDGGFDIGENDGGGADGSHQGASHS
HHGSSSHDTPSLSQSLHAAINNPIDKLFMMQSSYFSGDHA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattttatcctccagcacctggttcttttaatcgtcaaagcgaaccgggccaa
cccttgccgacggttccgcctattccctttcggcccacaactgataataataatgcagaa
ccatccgtttcggtgaagacggagtccggcctcctcgagactatctgcgccggctgcggt
cgcaccatcgccgacaagtacgtgatgcgggtcggcgagaggaattaccacgaggagtgt
ctcttgtgcacggcatgtggcgcgatgctgtcgcactcgtgtttcatacgcgacctcaag
ctctactgccgttctgattacgaaaggatcttcggggtgaagtgcgcgcggtgcatggag
aagatcagctgctcggatctggtgatgcggccggtatcgggcctgatcttccacgtggaa
tgcttcgcgtgttgcatgtgcggccagccgttgccacggggcgctcactacatcctcaga
cagggccagccgatctgcagacgagacttcgaacacgagctgtttctaaatagtccgcaa
gatgatgacttattggacgagaatcgaccacgggatggccgtcggggtccaaaacggccg
cggacgatccttacgtcggcacagcgacgtcagttcaaggcgtcgttcgaggtgtctccc
aagccttgcaggaaagttcgcgaagcactcgctaaggacactggccttagcgtgcgcgtg
gttcaagtgtggttccagaatcagcgcgcgaagatgaagaaactccagcggaaggccaaa
acggagcccggatccgataaagagccaaaggaggagcgaaggacggaaagtccacacagc
gatcacagtcattacttgaacgccctgaacatgcgcgatggggaatcttctagcttcccc
tcagccacccaaccgctcaaccccaataacccgtactcgcccgacgacgcatacccgggc
cactcgggggagagcttctgtagcagcgatctgtccctggacggtacagacggcggcttt
gacatcggcgagaacgatggcggcggcgcggacggtagtcatcagggtgcctcgcattct
caccatggctcatcatcgcacgacaccccgtcgctgtcgcagagtctgcacgcggccatc
aacaatcccatcgacaaattgttcatgatgcaaagtagttacttcagcggcgatcacgcg
taa
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