Cyphomyrmex costatus: 108782366
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Entry
108782366 CDS
T11118
Name
(RefSeq) transcriptional regulator ATRX homolog
KO
K10779
transcriptional regulator ATRX
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoa03000
]
108782366
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108782366
Transcription factors [BR:
ccoa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108782366
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108782366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DUF6489
Motif
Other DBs
NCBI-GeneID:
108782366
NCBI-ProteinID:
XP_018406141
LinkDB
All DBs
Position
Unknown
AA seq
2232 aa
AA seq
DB search
MDSVPKKGNKKRSNKIEKRILPYEMQRIDKTRNIQKNLKTFCDKEDDESSEKLFVSARFT
QKHHRTNNVSLQKRRIVDPTDSSSEDSFYTNENLSSSSKRNKQNKNESDRKVKSVRNVYS
LRKVSRSVVKGENILKNNKIFSDSNNDSSDTSSNKTKKHTIKHNRSEKILKPKTNNCSSD
SENDENDTNITLSVSKRTSKDTRQQNKKMNNSYNARSRDKAKKYDSTSESEDEKHIKQYR
RKRSETSQSISHINEERKRDKSSKQQLFNIQEDDSDNSSSKEFKTIKLHKVKHKYSMRQL
ADLDVDYTRTPKNFANDKSDKINEQSKQNFNDMEKIVTDCKEMCSNFQMYIESIERLHGK
GDEEKLILRSIEKIDKLRMTLKEKSKSLTTSYQSWSRNRKKSTAKRLNKVSDNKIANSSE
ESSSEEHEKRIEDEDKHVFDNKQSGNKAVSECDSEEIFSTDETRSPEKIVSSAKTEKGIN
NNETNINDEDGMSIDKSKNNDKHNVEVQDDSPELNLKKKISMERSSKKQLFSECNKSNDK
TKPLNKNESEIEDSPSRNSGSNMALENDRINQSIKNIINESSDMFDTSLEDAEKSTAEIE
TNCSKEELLQTFKDNILNHHKNSLQSEVSNEKERIFLKKKDLSNQDNQENAISVIKEVNN
DLTPSRKTNTDDNDSTPSRKTNTDDNDSVDDAETLAKKALLATDSDTLDNENYITNTAKS
TKVLFTDDTNQIERKHELEDNDSDVNSVSTIVLPTYTKDANINSEKTVDTETEIEANGKS
DDQPDRKSHKEISSSKDENDRANKAAKISLLESNSDDSTLLSLESEKFTNKKSESDSSKK
NAEAKLSLLASSSENSNSEPTSSEMTNVSKNIKRNRELESDEEHFVTRSKKKRFKLDENH
HYKNNKKLRMSCKVYLVRLSTEILKRHSDTLKKSRERLERKELESLLNLDKLEKSSKKNT
KKDSDSLTDNDSSSKVLKNSNKKKKTKEKSLMDYLDKIENEDAIETASVDMNFDTEELVH
QMNVDDVTISNEALISEADRIAKENLLNSSDSVDKEVDSDCSIKNDDIREKEENKKKKYR
EKSEDKTSKNDKKDKSDWRRDTILRTVFSDSDSDAEREKWEKKQEKIENKSKGNNDSDDK
AKLVKSKKKKRMSGRRIIDSDSDVKIMDVDSDSSSEISSVQNSSESDNTKKEKKKLKWIK
RRKRSNSSDTDSSLAEKPKPKRKRIKKMASDSDSSDVEVINSQGSTPGQSGRKNIRKVLK
DKQVAEDTKLAAKEEEERLKRIADRQALYNEMFEMRLAGEEKVDKLVLDFDTETKQELIT
VHKELVKHLKPHQAQGIKFMWDACFESLERVDTTSGSGCIIAHCMGLGKTLQVITLTHTL
LTHDATKIKTVLVVCPLSTVLNWKNEYNTWLKDLDDIEVYELTKFKKNFERKYQLQRWQN
TGGVMIIGYEMFRNLTGPNKNIRKSMKEIMLECLVDPGADLIVCDEGHLLKNEDTALSKC
MRSVKTMRRIVLTGTPLQNNLIEYHCMVQFVKPNLLGTKKEFSNRFVNPITNGQCVDSTA
FDVNLMKKRAHVLHKMLEGSVQRFDYSVLTPFLPPKQEYVIFVRLTDIQIKMYQYYLENF
AKRQFGSGRSHLFADFQALQRIWTHPIVLRLNAEKIEKANEKKELSSDSAGSLKDFVVDG
TTDEESTSSNDSSDDSDVQAIDDKKDEKEQTSVFKRKTRNNPIEEESTEQIKENPETESL
TDWWLQFVQPEHFDDVRTSAKLLLLFEILKECEQIGDKVLVFSQSLYSLTLIEEFLRKID
DQTQNGASCDTLDNHTGSWSLGLDYFRLDGQTSPENRNMWCKIFNRPTNMRARLFLISTR
AGGLGINLTAANRVIIFDASWNPSHDVQSIFRVYRFGQKKPCYVYRFLAAGTMEEKIYNR
QVTKLSLSCRVIDEQQIERHYSNHNLNELYTFEGYDKEKPTLNLPKDRLLAEIFLKFKDV
VENYHEHDSLLENKAEEELDEEERKQAWLEYEEEKKGKPVIHPMMNPIIVNQNNAFLQQL
IMMRNSIQSNMLSQNVLNEYENLQQLIRKDYPNASPEQQKMITNRAFTEMYDYWEKQATL
GNNQPVQLIQNPILPNFQQRPQAPNFQQRPQIPATSNLHINQVSQLNQLLSGQSMNYMNS
QHPAQLSDAQKGVVLPNLFIKQSISSNNNRSGIADQDVEIPTTSNTGTTRQSEMSSVQIA
AQSSDNSKIQEE
NT seq
6699 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtccctaaaaagggtaacaagaaaagaagcaacaagattgaaaaacgaatt
ttaccatatgaaatgcaacgaatagacaaaacgagaaacatacaaaaaaacttgaaaact
ttttgtgacaaagaggatgacgagtcttccgaaaagttatttgtttctgcaagattcacg
caaaaacatcatcgtacaaataatgtctcgcttcagaagagaagaatagtagatccaaca
gattcatccagcgaagattcgttttacacaaacgaaaatttgtctagctcatctaaaaga
aataaacaaaataagaacgagagtgatcgaaaagtgaaatctgtacggaatgtttattct
ttgcggaaagtttcaagatcagttgtaaaaggagaaaatatattgaagaataataaaata
tttagtgattcaaataatgattctagcgatacgtcatcgaataaaacaaaaaaacataca
attaaacataataggtctgaaaaaatattgaaacctaaaacaaataattgttcttctgac
agtgaaaatgatgagaatgatacaaatataacattaagtgtatccaagaggacttcaaaa
gatactagacaacagaataaaaaaatgaataattcttataatgcaagatcgagggacaag
gcaaaaaaatatgattcgactagtgaatctgaagatgaaaaacatataaaacaatatagg
agaaaacgctcagaaacgagtcagtcaatatcgcacattaatgaagaacgaaaacgtgac
aagtcatcgaagcagcaactttttaatattcaggaagatgattcagataacagttctagt
aaagaatttaaaacaataaaacttcataaagtgaaacacaagtactctatgaggcaattg
gcagacttggatgtagattatactaggacacctaaaaattttgcaaatgataagagtgat
aaaatcaatgaacaatcaaaacaaaattttaatgatatggaaaaaattgtaacggactgt
aaagaaatgtgttcaaattttcagatgtatattgaaagtatagaacgattacatggcaaa
ggagatgaagaaaaacttatattgagatctatagaaaaaattgataagttaaggatgaca
ttgaaagaaaagagtaagagtttaacaacttcttatcagtcgtggtctaggaataggaaa
aaatctactgcaaagcgattaaataaagttagcgataacaaaatcgctaactcttctgaa
gaatcgtcttcagaagaacatgaaaaacgtatagaagatgaggataaacacgtctttgat
aataaacagagtggaaataaggctgtgtctgaatgtgatagcgaagaaatattttcaaca
gatgaaacaagatcaccagagaaaatagtgagttcagcaaaaacggaaaaaggtataaat
aacaatgaaactaacattaatgatgaagatggaatgtcaattgacaaatcaaagaataat
gataaacataatgtagaagtgcaagatgattctcctgaattaaatttaaaaaagaagatt
agcatggaacgatcaagtaaaaagcaactcttttcagaatgcaataagagcaacgataag
acaaaaccgttgaataaaaatgaaagtgagattgaagattctccttcgagaaatagcggc
tcgaatatggcattagaaaatgatcgaataaatcagtcaataaagaatataatcaacgag
tcatcggatatgttcgacacatctctcgaagatgcagaaaagagcacagcggagatcgaa
acaaattgtagtaaagaagagcttttacaaacgtttaaagataacattttaaatcatcat
aaaaattccttacaaagtgaagtttcaaacgaaaaagagaggatatttcttaaaaaaaaa
gatttatcaaatcaagataatcaggaaaacgctatatctgtaatcaaggaagttaataac
gacttaacaccatccagaaaaacgaatacagatgacaacgactcaacaccatccagaaaa
acgaatacagatgacaacgactctgtcgatgacgctgaaacactggcaaagaaagctttg
ttagcaactgactctgacacattagacaatgaaaattacataactaacacagctaagtca
actaaagttttattcacagatgatactaatcagatcgaaagaaaacatgaattagaagat
aatgattctgatgtcaatagcgttagtacaatagtgcttccaacctatacaaaagatgcg
aatatcaactctgaaaaaactgttgacactgaaacggaaattgaagctaacgggaaaagc
gatgatcaaccagatagaaaatctcataaagaaattagctcttcaaaagatgaaaatgat
agagctaataaagctgccaaaatatctcttttagaatcaaattcggacgattctacactt
ttgtcattggaatcggaaaaattcaccaataaaaagtctgagtcggattcttccaagaaa
aatgccgaagcgaagctgtcacttctagcatcttccagtgaaaactccaattctgaacca
acttcgtctgaaatgacaaatgtttcgaaaaatattaaacgtaatcgtgagcttgagagt
gatgaagaacattttgttactagatccaagaagaaaagattcaaactcgatgaaaatcat
cattacaaaaataataagaaattgagaatgtcctgcaaagtttatttagtgcgattgagc
acggaaattcttaaacgccactcagatacgttaaaaaagtcaagagaacgtctggaacgt
aaggaacttgaaagtcttcttaatctggataaacttgaaaagagttccaaaaaaaataca
aagaaagattctgattcgttgacagacaacgattcgtcctcgaaggttttaaaaaactca
aacaaaaagaaaaagactaaagaaaaatctttgatggattatttggataaaatagaaaac
gaggatgcaattgaaacggcaagtgtagatatgaattttgatactgaagaattagttcat
caaatgaatgtagacgatgtaactatctctaatgaagctcttatatcagaggcagataga
atagcaaaagaaaatctgttaaattcctctgattcagtcgacaaagaagtggacagtgat
tgtagcataaagaatgatgatataagagaaaaagaagagaacaagaaaaagaaatatcgg
gagaaatctgaagacaaaacttcgaaaaatgataaaaaagataaaagcgattggaggaga
gacacgatattgagaacggtattttctgactctgattccgatgctgaaagagaaaaatgg
gagaaaaaacaagaaaaaattgaaaataaatctaaagggaataatgattctgacgacaaa
gcaaaattggttaaatctaaaaagaagaagaggatgtccggacgaagaatcattgattcg
gattcagatgttaaaataatggatgtagattctgatagttcttctgaaatttcaagtgta
caaaattcaagcgagtcagataacacgaaaaaagaaaaaaagaaattgaaatggattaaa
agacgtaaacgcagtaattcatcagatacggattcttcacttgcagagaaaccaaaacca
aaacgaaagcgtataaaaaaaatggcatctgacagtgatagtagtgacgtagaagtgata
aactcgcaaggatctacacccggtcaaagtggtcgaaaaaatatacggaaagttttgaag
gacaagcaagtagcggaagatacaaaactagccgctaaagaagaggaggaaagacttaaa
cgtatcgctgatcgtcaagctctgtacaatgaaatgtttgagatgagacttgccggtgaa
gaaaaagtagacaaattagttttagacttcgatacagaaacgaagcaggaactcattact
gtacataaggaattggtgaaacatctgaagccgcatcaagcgcaaggcatcaaatttatg
tgggacgcttgtttcgagtctctagaaagggtggacactacatccggatctggatgtata
atcgcgcattgtatgggtttgggtaaaacgttacaggtgattactctgacgcatacactt
ctcactcacgacgcgacaaagattaagacggtactggtagtttgcccattaagcacggta
cttaattggaaaaatgagtacaatacatggctgaaggatttggatgatatcgaagtgtac
gaactgacaaaatttaagaagaattttgagaggaaatatcaactgcagagatggcaaaac
accggtggtgtgatgatcattggctatgaaatgttccgtaatcttacgggtccaaataaa
aatattcgaaaaagtatgaaggaaattatgttggaatgcctagttgatccaggtgctgat
cttattgtttgtgatgaaggccatttattaaaaaatgaagatactgcattaagtaaatgc
atgagaagcgtgaagacaatgagacgtatagtacttactgggacacctttacagaacaat
ttaatagaatatcattgtatggtacagttcgtgaaacccaatttgttgggtacaaagaaa
gaattttcaaatagatttgtaaatccaataacaaacggtcagtgtgttgattctactgct
tttgacgttaatttaatgaagaaacgcgcacacgtgttgcacaaaatgttagaaggtagc
gtgcaaagattcgattactccgtgcttacgccgttcctgccacccaaacaggaatatgtt
atttttgtcagactgacagatattcaaattaaaatgtatcaatattacctagaaaatttt
gccaaacgtcaatttggttcaggaagaagccatctttttgctgattttcaagcattacaa
agaatctggacgcatcccatagttctacgtctaaatgcagagaaaatagaaaaagcaaat
gagaaaaaggaactttctagcgattcagcgggttcgttaaaagatttcgttgttgatggt
actaccgatgaagagagtaccagtagcaacgattcgagtgatgacagtgatgttcaggcg
atcgatgataaaaaagacgaaaaagaacaaacatctgtttttaaacgtaaaacaagaaat
aatcctatcgaagaagaatcaacggaacagattaaagagaatccagaaacagaatccctt
acagactggtggttgcagtttgtacaacctgagcattttgacgatgtaagaacgtcagct
aaactattacttctctttgaaattctaaaggaatgtgaacaaatcggtgataaagtgctc
gtattctctcaatctctatattctctcacattaatcgaggaatttttaagaaaaatagat
gatcagactcagaatggtgcatcttgtgacactcttgataatcataccggaagttggtct
ttaggactcgattactttcgattggacggtcagacttcgcctgaaaatcgaaatatgtgg
tgtaagatatttaatagacccaccaatatgagagcaagattattcctcatatccacacgc
gctggaggattaggaataaatttaactgcagcaaatagagtgattatatttgacgccagt
tggaatccctctcacgacgtacaaagcatatttcgggtatacagatttggacaaaaaaag
ccgtgttacgtatatcgatttctcgctgcgggaaccatggaggaaaaaatttacaatcgt
caagttacgaaactgtcgctttcatgccgtgtaattgacgaacaacaaatcgaacgacat
tacagcaatcacaatttaaacgagttgtatacgtttgagggatatgataaagaaaaacct
acattaaatttacctaaagatagactattagcggagatatttttaaagttcaaggatgtt
gtagaaaattatcacgaacatgactctctattggaaaacaaggcggaagaagaattagac
gaagaggaacgcaaacaagcttggttagaatatgaagaggaaaaaaaaggaaaaccagta
atacatccgatgatgaatccaataatagtaaatcaaaacaatgcgtttctacagcaatta
ataatgatgagaaattccatacagtctaacatgctttctcaaaatgtgttgaatgaatat
gaaaatctccaacaacttattcgtaaagattatccgaatgcatcaccggaacaacagaaa
atgataacaaatcgagcctttacggagatgtacgattattgggagaaacaagcaacgcta
ggcaataaccaacctgtacaattaatacaaaatccaattttgccgaattttcaacaaaga
ccacaagccccgaattttcaacaaaggccacaaattccggcaacgagcaatcttcacata
aatcaagtctcgcagttgaaccaattgctttcggggcaatcgatgaattatatgaactcg
cagcatcctgcgcaactaagtgatgcacaaaagggagttgtacttccaaatttatttata
aaacagagtatctcgtcaaataataatagaagcggaatcgcggaccaggatgtagagatt
cctactacaagtaatacaggaacaacacgtcagagcgagatgagtagcgtacaaatagct
gcgcaatcaagtgataacagtaaaatccaggaggagtaa
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integrated database retrieval system
