Cyphomyrmex costatus: 108782445
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Entry
108782445 CDS
T11118
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108782445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108782445
Membrane trafficking [BR:
ccoa04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
108782445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
DUF16
DUF3439
Motif
Other DBs
NCBI-GeneID:
108782445
NCBI-ProteinID:
XP_018406228
UniProt:
A0A151INQ1
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MSARRRHVVGPVVNRDLASSGSSRHYHDGNEASSRLLSEKTVDLDSSEQQPTTTTTTTTA
TTTTMTSRDRTNEFANAIRSMQSRTVARTTANLQNPRRARQIQSYSNFMMIAKNISRNIT
GTFIKLEKLALLAKKKSIFNDRQTEIEELTHIIKTDLKGLNLQIGKLQELGKSQRESFGS
SQSHHIASHSSSIVMTLQSKLANMSNHFKSVLEVRSENMREEQSRRQQFTQGSLSTMLPP
SVVSGRQGSLLLQEEISSSSVAIDLEPVMNQQLQQIIQDDTDAYMQSRAETMQNIESTIV
ELGGIFQQLAHMVKEQEEMVERIDSNMEDTELNVEAAHTEILRYFQSVTSNRWLMIKIFA
VLIFFFIFFVVFLA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacgcagacgtcatgttgtagggcccgtggtaaatcgcgaccttgcgagctcg
ggcagctcgcggcactatcacgatggaaacgaagcgagcagcagattgctgagcgagaag
actgttgacttggactcaagtgagcaacagccgacgacaacgacgacgacgacgacggca
acaacaacgacgatgacatcccgcgacaggaccaatgagtttgccaacgcaatccgctcc
atgcagagcaggaccgtggcgcggaccacagcgaacctgcaaaatccgcgccgtgcacgc
cagatacagagttactcgaacttcatgatgatagctaagaacattagcagaaacattact
ggcacttttatcaagctggagaaacttgccctgttggctaagaaaaaatccatatttaac
gacagacaaacagagattgaagagcttacacatattataaaaacggatctaaaaggctta
aatcttcaaatcgggaaattacaagagcttggaaagtcgcagagagaaagctttggttct
tcccaaagtcatcacattgcttcgcattcttcttcaattgtgatgacattacaatcaaag
ctagctaatatgtccaatcatttcaaaagtgttttggaagttcgttcagagaatatgaga
gaggaacaaagcaggagacagcagtttactcaaggatctctgtctactatgctccctccg
agtgttgtttctggaagacaaggttctttattactacaagaagaaatttctagtagttca
gttgcgatagatcttgaacctgtgatgaatcagcagttgcaacaaattatacaagatgat
actgatgcgtatatgcaatcgagagctgaaactatgcaaaatatagagtctactatagtt
gagttaggaggtattttccaacaattagcgcatatggttaaggaacaagaagaaatggtt
gaaaggatagatagcaacatggaagatactgagctaaacgtggaagctgcacacaccgaa
atactgagatactttcagtctgtgacaagtaataggtggctaatgataaagatatttgca
gtcctgatatttttctttatatttttcgtagtattcttagcataa
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