Cyphomyrmex costatus: 108782837
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Entry
108782837 CDS
T11118
Name
(RefSeq) non-homologous end-joining factor 1-like isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108782837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108782837
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
108782837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XLF
XLF_CC
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
108782837
NCBI-ProteinID:
XP_018406719
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MNSDCNNGQGKVWKNFKINNKDYMICFVKENESWKVLLTNLIEIWSETLTDESVFHKCQT
MNPLLNLEVFDWKEVVLDMLNNIPEYMHENRLEVTTYHLELQKKKGFIKLRFLLDLLKGT
PQQFWKSVTMPLCSSSMELIRRYKILLDLVKQKDEEIAEYKAEGAELIRNYIATKPFSEE
LFRTDDTGSTDFVNIFQSVLCFYNEITLLKSHAKLEVSSNDASGTNASKTDGNVFLDSSK
NDFVQKLRQDKLNNIQGPSKVEECTANSSSKASILKISSTSHTIPKKKNKKTLNDFIKFM
LFVLLCDMCYIC
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggattgtaataatgggcaaggcaaagtttggaaaaactttaaaataaataat
aaagattatatgatctgttttgtgaaggaaaatgagtcgtggaaagtccttttaacaaat
ctgatagaaatttggtcagagactctgacagacgaatctgtgtttcacaaatgtcagacc
atgaatcctcttttaaatcttgaggtttttgattggaaggaagtggtattggatatgtta
aataatatccctgaatacatgcatgaaaatcgtttagaagttacaacatatcacttagaa
ttgcaaaaaaaaaaaggtttcataaaattacgatttttactggatcttttgaaaggaacg
ccacagcaattttggaaaagtgtaactatgcctctctgctcgtcatcaatggaactgatt
cgccggtacaagattctactagatctggttaaacagaaagatgaagaaatagctgaatac
aaagcggaaggcgcagagttaattaggaattatatcgctacaaagccattcagtgaggaa
ttgtttcgcactgatgatactggatcaactgattttgtaaatattttccaatccgtgctc
tgtttttataacgaaataaccttgttaaagtcacacgcaaaactagaagtatcttcaaac
gacgcaagtggcactaatgcttcaaagactgatggaaatgtttttcttgattcatcaaaa
aacgattttgtacagaagctaaggcaagataaattgaataatatacaaggaccttcaaaa
gttgaggagtgtacagcaaattcttctagcaaagcttcaattttgaaaataagtagtaca
tctcacacgatacctaagaaaaaaaataagaaaactttgaacgacttcataaaatttatg
ttatttgtgctattgtgtgatatgtgctacatatgttag
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