Cyphomyrmex costatus: 108782969
Help
Entry
108782969 CDS
T11118
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccoa03009
]
108782969
Enzymes [BR:
ccoa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
108782969
Ribosome biogenesis [BR:
ccoa03009
]
Eukaryotic type
Other ribosome biogenesis factors
108782969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
Fibrillarin
FtsJ
Motif
Other DBs
NCBI-GeneID:
108782969
NCBI-ProteinID:
XP_018406874
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSNEFVHSVSVPRIYKVTADIVRRVREDGASLKTLIYEGKHPNVAGIYGLAVSTLQALPQ
LDQLFDKTQILTEQPRLNPWLARVLITELLWRKRCLKSCSKPVLTVLTYENKLREESKNL
GHTETFVDHKSKVKRPRYVRVNTLLLSVEEAITIFQKDGWQLLPKSTTYSSYLQSLSQLS
KPYFIQDLHVPEMLAFPPLTIFHKHSGYHDGEFILQDKASSLPVHLLNPVSGSVVLDMCA
APGMKATHVAAKLQNNGKVYAVEIDAKRFGTLLNQIEKTRALCVKSLNQDALTLDPKLYS
HVAYILVDPTCSGSGIVDRPRQTEMDGMPEPKRLQNLQSFQVYLLRFALFNFPNAKRIIY
STCSLHPEENEEVVDEVLANVGNAYRLLPIRQLLENNWTNFSSKNYNCGDFCLYSKPDND
FCNGFFVAVFERNFDVTLPKCRLKGGNEYNMNFIKADLNIKEDDMATTSAHQQEECGKKT
KKKKKKKKKEAVLMNDEQTKISTGIIEFEVSDIDNKIKAKSKKEIDKMDVCNNLCNFNHK
LALNESKDIQKETLDIMETKKSKHEDILQETVCDEKEQNKDIKLSKKKKKKEKKIKIDEI
YKIEQGEETVRPSKKRKKNNEIH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgaatttgtgcattctgtttcggtcccgcgtatctacaaagtcacggccgat
attgtacgccgcgtacgagaagatggtgctagtctaaaaacgctaatttacgaaggaaag
catcctaacgtggccggcatatacggcctcgcggtcagcaccttacaagcattacctcaa
ttagaccagctgtttgacaagacccaaattctaacggaacaaccgcgtctgaatccctgg
ttagccagagttctcataacggagcttttatggcgcaagagatgcctgaagagctgctcc
aagccagtcctaactgtcctaacttacgaaaacaaactacgggaagagtcaaaaaatctc
ggccacacagaaacttttgtcgatcataaaagcaaagtaaagagacctagatacgttcgt
gtcaatactcttcttttatcagtggaagaagcaataaccattttccaaaaggatggatgg
caattactaccgaaaagtacaacatattcttcatatctacaatccttatcgcagttatca
aagccatattttattcaagacctgcatgtaccagaaatgttagcttttccgcccttgaca
atctttcacaaacatagcggctatcacgatggcgagtttattcttcaagataaggctagc
agtttgccggtgcatttgttgaatcctgttagtggttctgtagtactggacatgtgcgct
gcgcccggtatgaaggctactcatgtggcagcaaaactgcaaaataacgggaaagtttat
gctgtggaaattgatgctaagagatttggaaccttactcaatcagatagaaaagactcgt
gccctctgcgtgaaatctcttaatcaagatgccttaactctcgatccaaagttgtattca
catgtggcatacattctagtcgatccaacttgttctggatcaggtattgtcgacagacca
agacagaccgagatggatggaatgcccgaaccaaagcgcttgcaaaatttacaatcgttc
caagtttatcttctgagatttgcgctgttcaattttccaaatgcgaaaagaataatctac
agcacttgttctctacatcccgaggagaatgaggaagtagtagacgaagttctggccaat
gttggaaacgcttatcgtttgttaccaattaggcaattacttgaaaataactggaccaac
ttcagctcgaaaaattataactgtggagatttttgtttgtactcgaagccagataatgat
ttttgcaatggttttttcgtcgcagtattcgagagaaattttgatgtaactctgccaaag
tgcagacttaaagggggtaacgaatataatatgaattttattaaggctgacttgaatatc
aaggaagatgatatggcgacaacatcagcacatcaacaagaggaatgtggaaagaagaca
aagaagaagaagaagaagaaaaagaaggaagcagttttgatgaatgacgaacaaacgaag
atatcgacaggtattattgaatttgaagtatccgatatagataacaaaataaaagcaaaa
agtaaaaaagagattgacaaaatggatgtttgcaacaatttatgtaattttaatcataaa
ttagcattgaatgaatctaaagatatacaaaaggagacattagacatcatggaaacgaaa
aaatcaaagcatgaagatatacttcaggaaactgtttgtgacgaaaaagaacaaaataaa
gacattaaactgtcaaagaaaaaaaagaaaaaagaaaaaaaaatcaaaattgatgaaatt
tataaaatagagcaaggggaagaaactgtaagaccatcaaaaaagagaaaaaaaaataac
gaaattcattaa
DBGET
integrated database retrieval system
