Cyphomyrmex costatus: 108782974
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Entry
108782974 CDS
T11118
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108782974
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
Laminin_B
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
108782974
NCBI-ProteinID:
XP_018406880
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MRGIGIWDLLLLVGSCVVLADPEADPSEELFNRLQLPKNRNEDKCYDENGRPQRCIPPFE
NAAFNVLIEATNTCGEDRPIEFCKQTGVQKKSCEICRRGDHSASFLTDHDNNDNATWWQS
DTMYEEYPNQVNLTLPLGKTFDITYVRVLFESPRPESWGIYKRKNEKSPWEPYQFYSATC
RDTYDLPESKETIRGDDTRVLCTSEFSDISPLTKGTVAFSTLEGRPSAYYFETNTELQEW
VQASDLKITLDRLNTFGDEVFGDAQVLKSYYYAIADIAVGARCACNGHAGECVNSTSVDG
KTRRVCRCEHNTAGPDCNECLPFYNDAPWGRATTTDAHECKPCNCNGYADRCYFDKELYK
LTGHGGHCLDCRANRDGANCERCRENYYQRPEDNYCVACNCNEIGSRSLQCNSEGKCQCK
PGVTGDKCNRCAANFYNFGSQGCTSCECSLAGSANNVPNCDTITGVCVCKENVEGKRCRE
CRPGFFNLAVDNEFGCTPCFCYGHSSVCQLATAYSKLFIESMFVRANERWSASVAGNPIQ
LQYDALTQTISATALDRDNVYFLAPDKFLGDQRASYNQHISFILRIGEAGPAPTARDVIL
EGGNGEQITQPIFGQNNRLPTVTPQEYKFKLHEHANYGWQPRLSSRAFMSILSNLTAIKI
RGTYTHQGRGFLDDVKLETAHRGAAGEPADWVEHCQCPHGYVGQFCESCAPGFHHDPPNG
GPFALCVPCNCNGHADICEAETGQCICQHNTAGSNCELCSRGYYGYPLKGNPDDCKPCPC
PDNGPCILLGNNPDPICSECPIGRTGPRCETCSDGYYGNPEKGLACRPCDCNNNIDLNAV
RNCNQETGECLKCVNNTAGFHCEECLAGYYGDALSDRKEDGCKLCQCYPPGTLELDDGRV
APCDQLTGHCACKPHVIGRNCDKCEEGYYHIMSGEGCTPCNCDLEGSYNRTCDPITGQCQ
CRLGVTGQRCDACEPYQYGFSREGCKLCDCDSIGSQDLQCDANGQCPCLTNVEGRRCDRC
KENKHNRQHGCVDCPDCYNLVQSAVNDHRRRLAELEDTLYKINSSPTVIKNSDFEKELKN
VQDRVKSLLTTAKQGSGSENKTLVEQLDELREQLNTIDKTYQTVDVVANDSRDITEEGLI
NIDEAEKVLDKIYEQLTEAEDYLGTDGASALSSAKLRAEQVGQQNQQMTSIAQEARVLAE
VNTNEAKKLHMLAEQARNTTMEAYNLAKQTISRYSNITDELRNLENKLAQLDDRMDEVKN
LTAIAATKSSTVSQEAIDLLILDLTLPQVDVKQLRQQVESVSSESLQIKEQAQLLLEQNE
DFIKEMTEKIKKSEELLERAQDQQAATAELLAELDKANETANDAVKRGDQTLKEAQETLK
KLGEFDAEVQRERVKAQSALKNIQKIEELINNANLQTRETERVLNGSEGNAKSAREIAQN
AQTYADKASTNANEIRMEANKTKIEALRLGNEAEKLHLRVDTTDSMIRQYEIQMAKDANI
TAEANYKVGQAKTNVTLASQQVDKALSEVAAIIRELENLPEIDDADLNRLEERLDAAENE
IKNANLDQRIRALTDAKNLQTQWVKNYEDEVSRLRIEVENIDDIRKALPNDCYQRVRLEP
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgagagggatcgggatatgggacctgctgttgcttgtgggaagctgcgtcgttctagcc
gatcccgaggccgatccttcggaggagctgttcaatcggctgcagctgccaaaaaatcgt
aatgaggacaagtgttatgatgagaacggcaggccgcagagatgtataccgccgtttgaa
aatgcagctttcaatgtgctaatagaggcgaccaacacatgtggcgaggatcgtcctatc
gaattctgtaagcagacaggcgtgcaaaagaagtcatgcgaaatttgtcgacgcggcgac
cactcggcctccttccttactgaccacgacaataatgacaatgctacttggtggcaatcg
gacaccatgtacgaagagtatcccaaccaggtcaatctcacccttcctctaggaaagaca
tttgacataacatatgtcagagtactgtttgagtcgcctcggccggaaagttggggtatc
tacaagcggaagaacgagaagtcaccgtgggagccttatcaattttattcagcgacgtgc
cgagacacgtacgacctgcccgagtctaaagagaccattcgcggtgatgacacccgcgtg
ctatgcacctcagaattctctgacatttctccactcaccaaaggcaccgtcgctttttcg
accttagagggccgaccttccgcctattattttgagaccaacaccgaacttcaggaatgg
gtacaagcatcggatttgaaaattactctagacagattaaacacattcggcgatgaagtt
tttggcgacgcgcaagtgctgaaatcttattattatgcgatagctgatatagcagtcggt
gcgagatgcgcttgcaatggccacgccggagaatgtgtaaacagtactagtgtcgatggc
aaaactcgcagagtttgccgatgcgagcataacaccgctggtccagactgcaacgagtgc
ctacctttttataatgatgctccttggggccgtgctacaactaccgatgcacacgaatgc
aaaccttgcaactgcaacggatacgcagacagatgttatttcgacaaggaattgtataag
ctaactggtcatggaggtcattgcttggattgtcgagcaaatcgcgatggtgccaattgc
gagcggtgtcgcgaaaactattatcaacggcccgaggataattactgcgttgcatgcaac
tgtaatgaaattggttcgagaagcttgcagtgtaatagcgagggtaaatgccaatgtaaa
cctggtgtaacaggggataaatgcaatcgttgtgcagccaacttctataattttggttcg
cagggctgtacttcatgcgagtgcagcttggcaggatcagcgaacaacgttcccaactgc
gatactatcacaggagtttgcgtttgcaaggaaaacgtcgagggaaaacgctgcagagag
tgtcgtccaggattcttcaatctggcagtagataatgagttcggttgcactccctgtttt
tgttacggccattcctcagtctgtcaactagcaaccgcttactcaaagttgttcatcgag
agtatgtttgtgcgagcaaacgagcgttggtctgcgtctgtggccggtaatccgattcaa
ttgcaatacgatgcactgacgcagacgatctcagctactgcgctcgatcgtgacaatgtg
tacttcctcgcgcccgataaatttctaggagatcagcgagcgtcttataatcagcacata
tcgttcatactgaggataggcgaagctggaccggctcccacagcgcgcgatgtaatttta
gaaggtggaaacggcgagcagatcacacagccgatctttggccagaacaatcgtttaccg
actgttacgcctcaagaatataagtttaaattgcatgagcatgccaactacggctggcaa
ccacgattatcttctcgtgctttcatgtcaattctgtcaaacttaaccgctataaagatt
cgtgggacttacactcatcaaggccgaggatttttggacgatgtgaaattagaaacggct
catcgcggcgcagccggtgaaccggccgattgggtggaacactgccaatgtcctcatggc
tacgtcggccaattttgcgaatcatgcgcgcccggattccatcacgatcctcccaacggc
ggtcctttcgctctttgtgttccttgcaattgtaatgggcacgctgatatttgcgaggcg
gagactgggcaatgtatctgtcagcataatactgcaggaagcaattgcgaattatgtagt
aggggatactatggttatccattgaaaggaaacccagatgattgtaaaccatgtccttgt
cccgataacggaccttgtattcttctgggcaataatccggatcctatctgctctgaatgt
cctattggcaggactggacctagatgtgaaacatgttccgacggttactatggaaatcct
gaaaaaggtctcgcttgccgtccttgcgattgcaacaacaatatcgatttaaatgcagtt
agaaattgtaatcaagaaacaggagaatgtctaaagtgtgtcaataatacagcgggcttt
cattgtgaagaatgtctagccgggtattatggagacgcgttatcggatcgcaaggaagac
ggatgtaagttatgtcagtgttatccaccaggcactttggaacttgatgatggaagagtt
gcaccttgcgatcaattaacaggacattgtgcctgcaaaccgcatgtcataggtcgcaat
tgtgacaagtgcgaagaaggctattatcatattatgagtggagagggttgcacaccttgt
aattgcgaccttgaaggttcttacaatcgcacttgtgatccgataacaggacaatgtcag
tgtcgacttggagtaacgggtcaacgttgcgatgcctgtgagccctatcaatatggattc
agtcgcgagggctgcaaactttgcgattgcgacagtattggatcccaagatttgcaatgt
gacgcaaatggacagtgtccttgcttgacaaacgttgaaggcagacgatgtgatcgctgc
aaggagaacaagcataatcgtcagcatggctgtgttgattgtcccgattgttacaatctt
gtacagtcggcggtcaatgatcaccgacgacgtttagctgagctcgaagacacactttat
aagatcaacagcagtcccactgttatcaagaactcggatttcgagaaagagctcaagaat
gttcaagatagagtaaaatcattattgactactgctaaacaaggatctggcagcgagaat
aaaacgttggtagaacagttagatgagttgcgtgagcaattaaatacgattgacaagacc
tatcaaaccgtggacgtggtagcaaacgattcacgtgatataactgaggaaggtttaatc
aatatcgatgaggcagagaaagttttggataaaatctacgagcagttaacggaagcagag
gattacttgggtacggatggagcgagtgctttaagttcggcgaaattgcgtgctgaacaa
gtcggtcagcaaaatcagcagatgacatcaattgcacaggaagcgcgtgtactcgccgaa
gtaaatacaaacgaagccaagaagcttcatatgttagcagaacaggcgcgaaacacgaca
atggaggcttataatcttgcaaagcaaactatatcgagatattccaatataacggatgaa
ctaaggaatctggagaataaactagcgcaattagatgatcgcatggatgaagtgaagaat
ctcactgccatagcagctactaaatcctcaactgtttctcaagaagcaatagatttactg
attctcgatttaacgcttcctcaggttgatgtcaagcaattgcgacaacaagtagaaagc
gttagcagtgagagcttacagataaaagagcaggcacaactcttattggagcaaaacgag
gattttatcaaagaaatgactgaaaaaattaaaaaaagcgaagaacttttagaaagagct
caagatcaacaagctgcaactgctgaactgttagctgaattagataaagccaatgagacg
gcaaatgacgctgtcaaacgtggcgatcagacactaaaagaagctcaagaaactttaaaa
aaattaggagaatttgatgctgaggtgcaacgtgaacgtgttaaggctcaaagtgctttg
aagaacattcagaaaattgaagaattgattaataatgctaacttgcaaactagagaaaca
gagagagtattaaatggatcggagggtaacgctaaaagtgcacgcgaaattgcgcaaaac
gctcagacttatgcggataaagcgagcactaatgcaaacgaaattagaatggaagcgaat
aaaactaaaatcgaagctttacggctcggaaacgaagctgagaagttacacctccgagtg
gacactacagattcgatgatcagacagtatgaaattcagatggccaaggatgcaaatatt
accgccgaggcaaactataaagttggtcaagcgaaaactaacgtgactctggcgtcgcaa
caagtcgataaagctttatccgaagttgccgcaatcatcagggagctcgagaatctacca
gaaatcgacgatgccgatttgaatcgcttagaagaacgcctggatgctgctgaaaatgaa
atcaaaaatgcaaatctggatcagcggatccgtgcactgacggatgcgaagaatctacaa
acgcaatgggtaaaaaattatgaagatgaagtcagcagactgcgaatcgaagtggagaac
atcgatgatattcgaaaggctttaccaaacgattgttatcagcgtgtccgtcttgagcct
tga
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integrated database retrieval system