Cyphomyrmex costatus: 108783262 Help Entry 108783262         CDS       T11118                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ccoa  Cyphomyrmex costatus Pathway ccoa03018   RNA degradation Brite KEGG Orthology (KO) [BR:ccoa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     108783262  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccoa03019]     108783262 Messenger RNA biogenesis [BR:ccoa03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      108783262   mRNA degradation factors    5'-3' decay     Decapping complex      108783262 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PAT1 PLATZ Ctf8 Motif Other DBs NCBI-GeneID:  108783262 NCBI-ProteinID:  XP_018407294 LinkDB All DBs Position Unknown AA seq 725 aa AA seqDB search MADTFFGFDTTLGENNLEDGVDCPLEEDELEEEEYDALNDETFGPDATISDWEEDHEKLA EITESNRLHNQNATNKKAISNIIEDNLSHLVLDKEGIVPRPGVWGSPLNLSFPKAQPRLS LPNACTVEELERGLIANRPPPGLSKPQTQQQQKKSEGSLLFEALSLNEKLQVNGLPPRFP PGLNLPGPHPIVLPSIRAPHPQLMQHPRILGLINQAGTVLRYPSPPHLMSHLMPQPIPRQ ALHGSYGFPPQLHPNLGGPQFLRPDHVMPAFPNNQINHQQHSYSHLGNQRNQNRSYYHNE QQIGHQPFFKNNQYPHRNPHDRNNQRPYHHQNYSHNINGNASEEYEHSGKLAIKAHEKQW LINIQLLQLNTIQPYIDDHYYVVFCDKRNKQHANQEQKDKKHHNNNGYHRDHRDWEPTPQ AASRSAYTPAQFENSLGKLHCSSVTAPRKLIDMDVVSNSDSQSTPQSQQKDTKRTRQLLL EIERLFTLQFKLEDLSNPLALIPETQQQQEGESDSNTAKTEPELINMILTCMQQLIQDDK LASMLSIRKGKALLLRFLPHLNATEYSKQLRELWTAIFKGLAVIGRRDCHILTDFYSEFR RWLDTVKDFDTILRLARALSDSATNHPVKNNSLTFALLNKFGVSAIAAMFEQVEQLCDTD DSLPSEWSSFVMTIVELIGDSPPCVAPCQPITANTLNKHLNRISSLKLERYTALACLLTD ANPLR NT seq 2178 nt NT seq  +upstreamnt  +downstreamnt atggcagacacttttttcggtttcgataccacgctcggagagaacaatctagaagatggt gtggattgtccattggaagaagatgaacttgaagaagaagagtatgatgcactgaatgat gaaacattcggtcctgatgctactattagtgattgggaagaagatcatgagaaacttgcc gaaattactgaatcaaatcgccttcataatcagaatgcaacaaataaaaaggctatttct aacataatcgaagataatttatcacatttggtattggataaagaaggaatagttccccga cctggggtttggggtagtcctttgaatttatcttttccaaaagctcaacctcgattatct ttaccaaatgcttgtacagtggaagaattggaaagagggcttattgcaaataggccacca ccaggtctcagtaaaccacaaacgcaacaacaacagaaaaaatctgaaggttcacttctt tttgaggctctctctttaaatgagaagcttcaggttaatggcctacctccacgttttcct ccaggattgaatctacctggaccacatcctatagttttgcccagtataagagcaccacat cctcaattgatgcaacatcctagaatattaggcttaattaatcaagctggtactgtgtta cgttatccttcaccaccgcatttaatgtcacatttaatgccacaaccaattccaaggcaa gctcttcatggctcttatggttttcctcctcaactacatcctaatttaggaggcccacag ttccttcgaccagatcacgtgatgcctgcatttcctaacaaccaaatcaatcatcagcaa cattcttattcacatttaggaaatcagagaaatcagaacagatcttactatcataatgaa caacaaattggacatcaaccattttttaaaaataatcaatatcctcatcgtaatcctcat gacagaaataatcaaagaccttatcatcatcaaaattattctcacaacattaacggtaat gcttcggaagaatacgaacactcaggaaaacttgctataaaagctcatgagaagcaatgg ttaattaatattcaattattacaacttaatacaattcaaccgtatattgatgatcactat tatgtcgtattctgtgataaacggaataaacaacatgcaaatcaagaacaaaaagataag aagcaccataataacaatgggtatcatagggatcatagagattgggaaccaacacctcaa gctgcttcaagatcagcatatacgccagctcaatttgagaattcattaggcaaacttcat tgcagcagtgtgacagcaccacgtaaacttatcgatatggatgtcgtatcaaatagcgat tctcaatctactcctcagtctcaacaaaaggacactaaaagaacacgacaattacttctt gaaattgagagactatttacacttcaattcaaacttgaagatttgagcaatccacttgct ttaattccggaaactcaacagcaacaagaaggagaatctgactcaaatacagctaaaact gaaccggaattaataaacatgattttaacatgtatgcaacaattaatacaagatgataaa ttagctagtatgctaagtattcgaaaaggaaaggcgttgctactgcgttttttacctcac ttgaatgcgacagaatatagtaagcagttgagagaattgtggactgcgatatttaaagga ttagccgtgataggccgtagagattgtcatatattaacagatttttattcagaatttcga agatggcttgatactgtgaaagattttgatactatattgcgattagcaagagcattatct gactctgctactaatcatcctgttaaaaataatagcttaacttttgctcttttgaataag tttggtgtatctgcaatagcagcgatgttcgagcaagttgaacaattgtgtgacacagat gattccctgccttctgaatggtcaagttttgtaatgacgatagttgaattgattggtgac tcaccgccctgtgttgcaccttgtcaaccaattactgcaaatacactcaataaacatctg aatcggatttccagtttaaaactagaaaggtatacagcgctagcgtgcttgttgactgat gccaatcctttacgatag

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