KEGG   Cyphomyrmex costatus: 108783506
Entry
108783506         CDS       T11118                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
ccoa  Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccoa03041]
    108783506
Enzymes [BR:ccoa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     108783506
Spliceosome [BR:ccoa03041]
 Complex C
  Other components
   Complex C specific factors
    108783506
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C HA2_N DEAD AAA_22 AAA_19 ABC_tran Cas3-like_C_2 nSTAND3
Other DBs
NCBI-GeneID: 108783506
NCBI-ProteinID: XP_018407579
LinkDB
Position
Unknown
AA seq 683 aa
MFRLVFSKPGDSIWQEDRPDIDAHSSTQFVYNAHHSLALDMQRQRLPIFKNKDHIIYLLE
KYQTLVLVGETGCGKSTQVPQYLLEAGWCTDGKKIGITEPRRVAATSLANRVADERNCIL
GTTVGYCIRFDDYTDETTRIKYMTEGILLRELMSDPLLTSYSVIILDEVHERTLLTDIIM
GLLKKIIRKRKSLRIIVSSATVDAEELRDFFNVNATKDSSKDSAVIMSVEGRLYPVDVFF
LKEPVANYVNGVVDTVLKIHDTEDSGDILAFLTGLDEVDQAVSLLSEHAKLIKDDKQKLL
PLPMYGSLPNTEQLKVFWRAAKDTRKVIVATNIAETSITIPNIVYVIDCGFVKIPWFEAE
TQTNSLVIVPISKASANQRAGRAGRVRTGKAFRLYTEEAYAELFEATPPEMQRSDLAPAV
LQLKALGIDNVLRFNFPSAPPSKNLVTGLELLYALGAIDSNGDLTMPLGLMMAEMPLEPV
LAKSLITSGEMGCSEEITTIIAMLQVQNVFIQPGGGQAILKARIAHRKFEVEEGDLLTLL
NVYTAFEQNKTPAWCQKYFLNHKALRRATEIRVQMHKMLKRLDIPLVSCNGNVQQILKCL
TAGLFPKAAYLHYTGTYRTVRGNKDLYIHPNSCLYTLQQPQWLLFCEILQTNKTYMKDLT
VIQPEMLLDAAPHFYERTSLESV
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgtttcggctggttttttccaagccgggagatagcatttggcaagaggataggcctgac
attgatgctcattcgtcgacacaatttgtttacaatgcacatcattcgcttgcactggac
atgcaacgtcaacgattgcctatattcaaaaacaaagatcacattatctatttgttggag
aaataccagaccttggttttagtcggcgaaacaggctgtggtaaaagtacacaggtccct
cagtatcttctcgaagcaggatggtgtacagatggaaaaaagattggcattacagagccg
agaagagtcgcggccacttctctggcgaatcgtgtggccgacgaacgtaattgtattcta
ggcactaccgtcggttattgtatacgcttcgatgattacactgatgaaacaactaggatt
aagtacatgacagagggtattctcctaagggaattaatgagtgatccgttattaacaagt
tactcggtcattatcctggacgaagtgcacgagagaacgctcttgactgatatcataatg
ggactgctgaaaaaaataatcaggaaacgaaagagtttgagaattatcgtatcgtcagcg
acggttgacgcagaggaacttcgagatttctttaacgtaaatgcgacgaaggactcgagt
aaagatagcgcggttatcatgagtgtcgaggggcgattgtatccggtggatgtatttttt
ctgaaagaaccggtggcgaattatgttaatggtgtagtagatacagttctaaaaatacat
gatacggaggattcaggtgatattctagcgtttctcacaggacttgatgaagtcgatcaa
gctgtatcccttttatcggaacacgcaaagcttataaaagatgacaaacagaaactgctt
cctttgccgatgtatggatcgcttccgaatacggaacagcttaaggtattttggagggcc
gctaaagacactcgcaaagttatcgtagcgacaaatatcgcggaaacgtctattactatt
ccaaatatcgtttatgtaatcgattgcggttttgtcaagataccctggtttgaagcggaa
acgcagacgaacagcctcgttatcgtgcccatatcgaaagcttccgccaatcaacgagct
ggccgcgcaggccgcgtacgtactggaaaagcatttagattgtacacagaagaggcttac
gcagaattgttcgaagctactcctccggaaatgcaacggtcagatttggcgccagcggta
ctgcaactgaaagccttgggcatcgataatgtattgcgtttcaattttccatctgcgccg
cccagcaaaaatctagtcacgggattggaattgctttacgcgttaggtgcgatcgacagt
aacggagatttgacgatgccattaggtcttatgatggcggagatgccattggaaccagtg
ctggcgaaatccttaatcacatctggtgaaatgggatgttccgaggagatcacgacaata
atcgccatgctacaagttcagaatgttttcatacaacccggcggagggcaagcgattcta
aaagcaagaatagctcatcgcaaattcgaagtggaagaaggagatcttcttaccttgttg
aatgtctacacagcttttgaacagaataaaacgcccgcctggtgtcagaaatatttcctt
aatcataaagctttgcggagagctacggaaattcgcgtgcagatgcataaaatgctgaaa
cgtttagacattccattggtatcctgcaatgggaatgttcaacaaattcttaaatgtttg
accgctggtctttttcccaaagcggcatatttacattatacaggtacatatagaacggtt
cggggcaacaaggatttgtacattcatccaaatagttgcttatatactctacaacagccg
caatggttactattttgcgaaattttgcaaacaaacaaaacttacatgaaggacttgact
gtcattcagccagaaatgttgttggatgcggcaccacacttttatgagagaacatcactt
gaatctgtttaa

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