KEGG   Cyphomyrmex costatus: 108783511
Entry
108783511         CDS       T11118                                 
Name
(RefSeq) histone deacetylase Rpd3-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03082  ATP-dependent chromatin remodeling
ccoa03083  Polycomb repressive complex
ccoa04213  Longevity regulating pathway - multiple species
ccoa04330  Notch signaling pathway
ccoa04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108783511
   03083 Polycomb repressive complex
    108783511
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    108783511
   04350 TGF-beta signaling pathway
    108783511
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    108783511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccoa03036]
    108783511
Enzymes [BR:ccoa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108783511
Chromosome and associated proteins [BR:ccoa03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     108783511
   HDAC complexes
    Sin3A-HDAC complex
     108783511
    BRAF-HDAC complex
     108783511
    REST complex
     108783511
    SHIP complex
     108783511
    MiDAC complex
     108783511
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108783511
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108783511
  Chromatin remodeling factors
   NuRD complex
    108783511
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 108783511
NCBI-ProteinID: XP_018407589
UniProt: A0A151IM03
LinkDB
Position
Unknown
AA seq 497 aa
MDPVKMSMQPHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYR
PHKATADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAG
GSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI
DVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDD
SYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPF
LMVGGGGYTIRNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHISPSNMANQNT
PEYLDKIKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSEAEEKVNPDDRLPQRDLDKRM
QHENEYSDSEDEGEGGRRDNRSYKGSRKRPRLEKGQEAMDTDIKKEEDIKTEPKENEKDE
KVNPTNEETKKDGGANP
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggatccagtaaaaatgtctatgcagccgcatagcaggaaacgcgtctgctactattac
gacagtgatattggaaattactattatggccagggacatcctatgaaaccacatcgcata
aggatgacacataatttacttctgaactatggtctttacaggaagatggaaatataccgg
cctcataaagccacggcagacgagatgacaaaatttcacagtgatgagtatattagattc
ctgaggtctataaggccagataatatgtcggaatacaacaaacaaatgcaacgatttaat
gtaggagaagattgtcctgttttcgacggtttgtatgagttttgtcaattatcggctggc
ggatctgtagctgccgctgtaaagcttaataagcaagcttctgaaatctgcattaattgg
ggcggtggtttacatcatgcaaaaaagagcgaagcttccggcttttgttatgtgaatgac
attgtgcttggaatattggaattgctgaagtatcatcagagagtcttgtatattgatatt
gatgttcatcatggcgatggcgtagaagaagctttttatacaacagatagagtaatgact
gtttcgtttcataagtatggcgaatattttcctggaacaggagatcttcgtgatattgga
gcaggcaagggaaagtattatgcggttaatatacctttgagagatggtatggacgacgat
agctatgaatcgatctttgtccctattatctcaaaagtgatggaaacatttcaaccctct
gctgtagttctacagtgtggcgctgattcattgactggtgatcgcttggggtgttttaat
ttaactgtcagaggccatggtaaatgcgtggagtttgtgaaaaaatataatttacctttc
ttgatggttggaggtggtggttataccatcagaaatgtgtctagatgttggacgtacgaa
acgtcggttgctctcggctgcgagattgctaatgagcttccttataatgattattttgaa
tattttggcccagacttcaaattacatattagtccatcgaacatggcgaaccaaaatact
cctgaatatctagacaaaataaaaacaaggctgttcgaaaatttaagaatgctacctcac
gcgcctggcgtacaagtccaagcaatacctgaagatggagcggttattgaggactcagaa
gctgaagagaaggtaaatccagatgacagattgcctcaacgtgacctagataaaagaatg
caacatgaaaacgaatatagtgatagtgaagacgaaggcgaaggcgggcgaagagataat
agatcgtacaagggatctaggaagcgaccccgtttggaaaaaggtcaagaggccatggat
actgatataaagaaagaagaagatataaagacagaaccaaaagaaaatgaaaaggacgaa
aaagtaaaccccacgaatgaggagactaagaaagacggtggggcgaatccctga

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