Cyphomyrmex costatus: 108783552
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Entry
108783552 CDS
T11118
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccoa03009
]
108783552
Enzymes [BR:
ccoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108783552
Ribosome biogenesis [BR:
ccoa03009
]
Eukaryotic type
90S particles
Helicases
108783552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
Cas3-like_C_2
AAA_22
P-loop_SecA
dsDNA_bind
Motif
Other DBs
NCBI-GeneID:
108783552
NCBI-ProteinID:
XP_018407650
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MSEEVKHFSDLKLNSWLLAQCESMDLKKPTPIQQNCIPRILMGEDCIGCAKTGSGKTLAF
ALPILQKLYEDPYGIFALVLTPTRELAFQIADQFAAIGKAINLKKCVIVGGMDMMEQGLE
LSKRPHIVVATPGRLADHLDSCNTFSLQKIKFLVLDEADRLLGGQFDEQLKTIFAALPKQ
KQVLFFSATMTDSLDKVRQLASAEVFTWQEKDDSGIATVKELDQRYVLCPKDVLDSYLVE
VIRMFRTTNKDGSIMIFTNTCKHCQLLSMTLNDVGFTNVALHAMIKQKERLVALNKFKSN
HVQILIATDVAARGLDIPTVQLVINHVIPNVPKEYIHRVGRTARAGQNGLAISLITPNDI
KLLHAIEDVIGIKLMEYKVDDKEIITILTQISVAKREAEIKLDETDFYEKKMINKQKKLI
LVSYS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagttaaacatttttcagatttaaaactaaattcttggctccttgcgcaa
tgcgagtctatggacttaaaaaagccaactcctattcagcagaattgcattcctcgaata
ttgatgggtgaagattgcataggttgtgcaaaaactggtagtgggaaaactttggcattt
gccttgcctattttacaaaaattatacgaggatccatatggtatatttgctcttgtgcta
acaccaacaagggaactagcttttcagattgctgatcaatttgctgcaattggcaaggct
attaatttaaaaaaatgtgtaattgttggtggcatggatatgatggagcaaggattagaa
ttgtccaagcggccacatatagttgtagctacaccaggtcgattggcagatcatttggac
agctgcaatacgttctccttgcagaagataaaatttttagtattggatgaagctgacaga
cttctcggtggacaatttgatgaacaattaaagacaatatttgctgcattgcccaagcag
aaacaagtgttattcttcagtgctacaatgacagatagtctggataaagtgaggcaatta
gcttctgctgaggtttttacatggcaagagaaagatgactctggtattgccactgtgaag
gaattggatcaacgttacgtattgtgtcccaaagatgtgctcgattcatatctggtagaa
gtaattaggatgtttcgtaccacgaacaaggatggttctatcatgatattcaccaacact
tgcaaacactgtcaattattatctatgactttgaatgatgtcggatttacaaacgtggct
cttcacgcaatgataaagcaaaaggaacgtttagtagcattaaataagttcaagtcaaat
catgtacagatattgattgctactgatgtcgcggcgagaggtctggatatccccacagta
caattagtcattaatcatgtaataccgaatgtaccaaaagaatacattcatagagtcggt
agaacagctcgcgcaggtcaaaacggtttagcgataagcttgataactccaaacgatata
aagttgttgcatgcgattgaagatgtcataggcattaaattaatggagtacaaggtagac
gacaaggaaatcattacaattttgacgcaaatatcagtggcaaaacgagaagcagaaatt
aaactggacgagactgatttttatgaaaagaaaatgatcaataagcaaaagaagttaatc
ttagttagctattcttaa
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