Campylobacter concisus ATCC 33237: CCON33237_0634
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Entry
CCON33237_0634 CDS
T04635
Symbol
trmA
Name
(GenBank) tRNA m5U54 methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ccoc
Campylobacter concisus ATCC 33237
Brite
KEGG Orthology (KO) [BR:
ccoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoc03016
]
CCON33237_0634 (trmA)
Enzymes [BR:
ccoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CCON33237_0634 (trmA)
Transfer RNA biogenesis [BR:
ccoc03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CCON33237_0634 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_12
MTS
RNase_3_N
Methyltransf_23
DREV
Motif
Other DBs
NCBI-ProteinID:
ALF47331
UniProt:
A0A0M4TLN0
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All DBs
Position
635420..636523
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AA seq
367 aa
AA seq
DB search
MDCNYLKECGSCTLFAPYDEQILFKTDLVKQNFSEFYDGKFDVFSSNPKHYRTRAEFGIW
HEGSKLSYTMHASEKGKRIFIDECPKVCEQISELMPSLIYSLQESEILGAKLFGVEFISC
KSGVLVTLLYHKKLDSEFEAEIKNLANKLNVTILARSRGQKLLSGELNLIDELDVGGEIY
KFSLSENAFIQPNRAVNEKMIAWAKECVEAGGDLLELYCGHGNFTIPLSFKFKNVLATEI
SKSSIANALKNCELNKAKNIKFLRMDADELMSAFAGVREFNRLKEINLSDFSFSHILVDP
PRAGLSESVVNFIKNFKNIIYVSCNPETLKENLNELCKSHKVIKFAIFDQFANTHHIECG
VLLRAKE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
ttggattgcaattatctaaaagagtgcggctcttgcactctttttgccccttacgatgag
caaattttatttaaaactgaccttgtaaaacaaaatttttcagagttttatgatggcaaa
tttgatgtgtttagctccaatccaaaacactaccgcacaagggctgagtttggtatctgg
cacgaaggtagcaagcttagctataccatgcatgcaagtgagaagggcaagagaattttt
atagatgagtgccctaaggtttgtgagcaaatttcagagcttatgccaagcttaatttac
agcttacaagagagtgaaatactaggcgcaaagctttttggcgtagaatttatctcttgt
aaaagcggtgttttagtcacgcttctttatcacaaaaaacttgatagtgagtttgaagca
gagattaaaaatttagccaataagcttaatgtcacgatacttgctagatctcgcgggcaa
aagctactaagtggtgagctaaatttgatagatgagctagatgttggtggtgaaatttat
aaatttagcctaagtgagaatgcctttatccagccaaatagagccgtaaatgaaaagatg
atagcttgggcaaaagagtgcgtggaggctggtggcgacctgctggagctctactgcgga
catggaaattttactattccgctttcgtttaaatttaaaaatgtccttgccactgaaatt
tcaaaaagctcgatcgcaaatgcccttaaaaactgcgagctaaacaaagctaaaaatatc
aaatttctacgtatggacgctgatgagcttatgagtgcatttgctggcgttagggaattt
aacaggctaaaagagataaatttaagcgactttagcttctcgcacattcttgtcgatccg
cctcgtgcaggactaagcgaaagtgtcgtaaatttcatcaaaaatttcaaaaatatcatt
tacgtctcgtgcaacccagagactctaaaagaaaatttaaatgagctttgtaaaagccat
aaagtgataaaatttgccatttttgatcagtttgcaaacactcaccacatcgagtgcggc
gtgctactaagggcaaaagaataa
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