Campylobacter concisus ATCC 33237: CCON33237_0712
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Entry
CCON33237_0712 CDS
T04635
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccoc
Campylobacter concisus ATCC 33237
Pathway
ccoc03420
Nucleotide excision repair
ccoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCON33237_0712
03430 Mismatch repair
CCON33237_0712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoc03400
]
CCON33237_0712
Enzymes [BR:
ccoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCON33237_0712
DNA repair and recombination proteins [BR:
ccoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCON33237_0712
MMR (mismatch excision repair)
Other MMR factors
CCON33237_0712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
CarD_TRCF_RID
eIF3_p135
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALF47401
UniProt:
A0A0M4TMH1
LinkDB
All DBs
Position
complement(706725..708794)
Genome browser
AA seq
689 aa
AA seq
DB search
MEKLLSNLNEAQCEAATHIDGPMLILAGAGSGKTKTITTRLAYLIGEVGIDAANTLTLTF
TNKAANEMRSRAMAMLSQSGKNYSPLLCTFHKFGLLFLKLYIEKLGRKNNFVIIDTDDKK
RIIKSFESPVATAILSSEISNYKNSLLSVEEVCKNANFSSFDKSKDNFYKQAAQIYEKYE
DYLKTNNLVDFDDLLGLTYKILDENEDLAREISNRYKYIMVDEYQDTNDLQYKLLKKLCL
CHENICVVGDDDQSIYGWRGAKIDNILNFKDQFKDVKIIRLEKNYRSSNAILKAANELID
HNRNRLGKKLVGTKGEGEAVNLIESFDESVEAGKIAKCIKELLSKGVQAKDIAILYRINA
LSRSLEDGLNKEQIAYKMVGGVKFYERAEIKDIISYLRLINNPNDDFSIRRIINRPKRGL
GKVSLDKLEKIAFDSKISIYEAISNISGNDEAFSKKVKSALVEFASNLKELQESSSVFDL
IDKFEAKFGVKKYYESLPDGAERAANIDEFYAVLKDQIKQNPSFDLEEFLNEITLTSEQD
GISDEAISIMSVHASKGLEFEHLFVIGLEEGFFPLIGDGSDIEEERRLAYVAITRAKKTL
SLSFANSRFYKGQRTRLNKSRFLSESGITHGSLVIEKSNEFKKGDLVKHKIFGIGRVSAV
SKIKKEFKLTINFGGNVREIMSSFVEKAV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactactatcaaatttaaacgaagcccaatgcgaagcagccactcatatagat
ggtccgatgctcatacttgcaggagctggcagcggtaagacaaagacgatcacgactaga
cttgcctacctcatcggcgaggtcggtatagacgcagcaaatacactaactcttactttt
acaaacaaagccgccaacgagatgcgtagtagagccatggcgatgctaagccaaagcggt
aaaaactattcgccgctactttgcacatttcataaatttggacttttgtttttaaagctt
tacatagaaaaacttggtagaaaaaacaacttcgtcataatcgacacagatgataaaaaa
cgcatcatcaaaagctttgaaagtccagttgccacggcgattttgtcaagcgaaatttca
aactacaaaaactcacttttaagcgtcgaagaggtctgtaaaaacgcaaatttctcttca
tttgacaaaagcaaggataacttttacaaacaagctgctcaaatttatgaaaaatatgaa
gattatctcaaaacaaataatcttgttgattttgacgatctactaggacttacgtataaa
attttagatgaaaacgaagatcttgcgagagaaatttcaaatcgctacaaatacataatg
gtcgatgagtatcaagatacaaacgaccttcagtacaaactcctaaaaaagctctgcttg
tgccacgaaaatatctgtgtcgtgggtgacgatgaccaaagcatctacggctggcgtggt
gctaagatagataatatcttaaattttaaagatcagtttaaagacgtaaagatcataagg
ctagaaaaaaactaccgctcaagcaatgcaatacttaaagcagcaaacgaactaatagac
cacaaccgtaaccgccttggcaaaaagcttgtgggcacaaaaggcgaaggcgaggctgta
aatttgatagagagctttgatgagagcgttgaggctggtaagatcgcaaaatgtataaaa
gagcttttaagcaaaggcgtgcaagcaaaagatatcgcgatcttataccgcataaacgcg
ctctctcgctcacttgaagatggactaaacaaagagcagatcgcctataaaatggtcggt
ggtgtaaaattttacgaaagagccgagatcaaagatatcataagctacctaaggctgata
aataatccaaacgatgatttttcaataaggcgcatcataaaccgtccaaagcgcggcctt
ggtaaagtaagccttgataagcttgaaaaaatagcatttgatagcaaaatttccatttac
gaggcgatctcaaacatctctggtaacgatgaagcctttagcaaaaaggtgaaatcagct
cttgttgagtttgcaagcaacctaaaagagcttcaagaaagcagctcagtttttgaccta
atagataaatttgaagctaaatttggcgtgaaaaaatactacgagagcttgccagatggc
gctgaaagagcggcgaatatcgatgagttttacgctgttttaaaagatcagatcaagcaa
aatccaagctttgatctggaggagtttttaaacgagatcacgctaacaagcgagcaagac
ggcatcagcgatgaggctattagcattatgagtgtgcatgctagcaagggtcttgagttt
gagcacctttttgttatcggtcttgaagagggatttttcccactaattggcgatggaagc
gacatcgaagaggagcgcaggctagcttacgtggcgataacaagagctaaaaagacactt
agtctaagctttgcaaattcgcgcttttacaaaggtcagcgcacgaggttaaataagagt
agatttttaagcgagagcggtatcacgcatggctcgctagttatcgaaaagagtaatgaa
tttaaaaaaggcgaccttgttaaacataaaatttttggtatcggcagggtgagtgcggtt
agcaagatcaaaaaagagtttaagctaactataaattttggtggcaacgtaagagagatc
atgtcaagcttcgtggaaaaggccgtatga
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