Campylobacter concisus ATCC 33237: CCON33237_0872
Help
Entry
CCON33237_0872 CDS
T04635
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
ccoc
Campylobacter concisus ATCC 33237
Pathway
ccoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCON33237_0872 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccoc03021
]
CCON33237_0872 (rho)
03019 Messenger RNA biogenesis [BR:
ccoc03019
]
CCON33237_0872 (rho)
Transcription machinery [BR:
ccoc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CCON33237_0872 (rho)
Messenger RNA biogenesis [BR:
ccoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCON33237_0872 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Mor
OB_RNB
ATPase_2
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ALF47554
LinkDB
All DBs
Position
complement(862499..863842)
Genome browser
AA seq
447 aa
AA seq
DB search
MENNNQTEQGAAQSTKTTKKHQTSRTHVPVDGHKIEELRTLSLDELVQIANSVGVENPRE
FRRQDLIFEILKTQTKQGGFILFTGILEITNEGYGFLRAVDANLSDSSNDAYVSNSQIRK
FALRVGDIITGQVREPKDQEKYYALLKIEAVNYMPLADAKERPLFDNLTPLFPTEKLNLE
YDPMKLTGRVLDLFTPIGKGQRGLIVAPPRSGKTELMKELAHGIAKNHPEAQLMVLLVDE
RPEEVTDMQRCVKGEVFSSTFDLPAFNHVRVAELVIEKAKRLVEMGKDVIILLDSITRLA
RAYNTVTPPSGKVLTGGVDANALHKPKRFFGAARNIEHGGSLTIIATALIDTGSRMDEVI
FEEFKGTGNSEIVLDRNISDRRIYPAINVLKSGTRKEELLQKPDELQKIWAIRSAIATMD
DVEALKFLYAKMLKTKDNKELLSILNE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaataaccaaactgagcaaggtgctgctcaaagcacaaaaactacaaaaaaa
caccaaacatcaagaacccacgtaccagtcgatggacacaagatcgaagagctaagaacg
cttagtttagatgagctagtgcagatcgcaaatagcgttggcgtcgaaaatccacgcgaa
tttcgcaggcaggatttgatatttgaaatactaaaaacccagacaaaacaaggtggcttt
atactatttactggaattttagagatcacaaacgaaggttatggctttttaagggctgtt
gatgcaaatttaagcgacagctcaaacgacgcttatgtttcaaactcacagatccgtaaa
tttgcacttcgtgtgggcgacatcatcactggccaagtaagagagccaaaagatcaggaa
aaatactacgctcttttaaagatcgaggcagtgaactacatgcctctagcagacgcaaaa
gagaggccgctatttgacaacctaaccccacttttcccaactgaaaagctaaatttagaa
tatgatccaatgaagctaacgggccgtgtacttgatcttttcacacctattggcaaaggt
cagcgtggtctcatcgtcgcacctccaagaagcggtaaaactgagcttatgaaagagcta
gctcacggtatcgctaaaaatcatccagaagcccagctcatggtacttttggtcgatgag
agaccagaagaagttacagacatgcagcgctgcgtaaaaggcgaggtatttagctcgaca
tttgacctgccagcgtttaatcacgtccgcgtggcagagctagtcatcgaaaaggcaaaa
cgtctagttgagatgggcaaagacgtcattatattgcttgatagcataacccgtctagca
cgtgcctacaacacagtcaccccaccaagcggcaaggtgctaacaggcggcgtggacgca
aacgcgcttcacaaaccaaaacgcttctttggcgcagctagaaacatcgagcatggcggc
tcgctaaccatcatcgcaaccgcactaatcgacactggctcgcgcatggatgaagtgata
tttgaggagttcaaaggtactggcaacagcgagatcgtgcttgaccgcaatatctcagac
cgtagaatttacccagctatcaacgtgctaaaatcaggtacaagaaaagaagagctactt
caaaaacctgatgagcttcaaaaaatttgggctattcgctctgcgatcgccacaatggac
gacgtcgaagcgcttaaattcttatatgcaaaaatgctaaaaacaaaagacaacaaagag
cttctctctatcctaaacgagtaa
DBGET
integrated database retrieval system
