Campylobacter concisus ATCC 33237: CCON33237_1018
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Entry
CCON33237_1018 CDS
T04635
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
ccoc
Campylobacter concisus ATCC 33237
Brite
KEGG Orthology (KO) [BR:
ccoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoc03016
]
CCON33237_1018 (ybbB)
Enzymes [BR:
ccoc01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
CCON33237_1018 (ybbB)
Transfer RNA biogenesis [BR:
ccoc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CCON33237_1018 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_SelU
Rhodanese
RsgA_GTPase
DUF4363
Motif
Other DBs
NCBI-ProteinID:
ALF47693
UniProt:
A0A0M5MEB1
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All DBs
Position
complement(1022793..1023800)
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AA seq
335 aa
AA seq
DB search
MPLFELDVEQWLEKRSSFEILIDARSPHEFLYSHIKDAINLYALNDAEHKEVGTLYKSDR
SLAKSLGAKYICKNLQNIIDEVYKRAKVGSAIGIYCAKGGLRSNSVGYVLSMIGYRVFRL
SGGYKAYRNHVLEFLNRPLSTKFITFFGNTGCYKSKLIRTLSPSIDLEAMANHLGSVFGA
INGAQPSQKSFEDALFEKLITLKDEICFIEGESRRIGSLSLPKSLYEAMRSGINVEVSAS
LEKRISCIVDDYKSVDKAFFDECMKKISPFIDKKARDEAVAKFNENDIAKVAEILLTKYY
DKVYKKNENINVFIKSDNFDEAVKKLNDIKNEAKF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttatttgagcttgatgtagagcagtggctagagaaaagaagctcttttgaaatt
ttaatagacgcaagatcgccacatgaatttttatattcacacataaaagatgccataaat
ttatatgctttaaatgatgcagaacataaagaggtaggcacgctctataaaagcgataga
tccctagcaaagagtcttggtgcaaagtatatctgcaaaaatttacaaaatatcattgat
gaggtttataaaagagccaaggttggttcagctattggcatctactgcgctaaaggcggg
cttagatcaaattctgttggctatgtgctaagcatgataggatatagagtttttagactt
agtggcggttataaagcttatagaaatcatgttttagaatttctaaatcgacctttgagt
acaaaatttatcactttttttggaaatactggctgctataaaagtaagctaataaggact
ctaagcccgtcaatagaccttgaagctatggcaaatcatttaggatctgtctttggggcg
ataaatggcgcgcagccaagccaaaaaagctttgaagatgcgttgtttgaaaagctcatc
acgctaaaagatgaaatttgctttattgagggcgaaagtagaagaataggctcattaagc
ttgccaaagagcctttatgaggcgatgcgtagtggcataaatgtcgaagtaagtgcaagt
ttagaaaaaagaatttcttgtatagtagatgactataaaagtgtggataaagcctttttt
gacgagtgtatgaagaaaatttcaccatttatcgataaaaaagctagagatgaagctgtg
gctaaatttaatgaaaatgacatcgccaaagtagctgaaattttactcacaaaatactat
gacaaggtctataaaaaaaatgaaaatattaatgttttcataaaatctgataactttgac
gaagccgttaaaaagctaaatgatataaaaaatgaagcaaaattttag
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