Campylobacter concisus ATCC 33237: CCON33237_1729
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Entry
CCON33237_1729 CDS
T04635
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccoc
Campylobacter concisus ATCC 33237
Pathway
ccoc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCON33237_1729 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccoc03021
]
CCON33237_1729 (rpoA)
03400 DNA repair and recombination proteins [BR:
ccoc03400
]
CCON33237_1729 (rpoA)
Enzymes [BR:
ccoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCON33237_1729 (rpoA)
Transcription machinery [BR:
ccoc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCON33237_1729 (rpoA)
DNA repair and recombination proteins [BR:
ccoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCON33237_1729 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALF48369
UniProt:
A0A0M4TNF8
LinkDB
All DBs
Position
complement(1727941..1728957)
Genome browser
AA seq
338 aa
AA seq
DB search
MRKITTSAYMPTEIEVKSVSENVANITAYPFEAGYAVTLAHPLRRLLYTSTVGFAPIGVK
IKGVSHEFDSMRGMLEDVAFFIINLKKIRFKLKSTSEREVIEYSFKGPKEITGADLNNDL
VEIVNPDAYLATINEDAELNFSVIIQKGIGYVPSEEIREEIEDDYIALDAFFTPVKKAVY
DIQNVLVEDDPDYEKIVFTITTDGQVSPIEAFKNCLEAMYQQMSVFKGILDIDVSTPVAS
SSTGGEFSKLLSSVEDLNLSARSFNCLDKADIRFIGELALMDENELKELKNLGKKSLEEI
KAVMEEIGYPVGADVLKDGKEQLRKKITELKAQMSVKE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagattactacatcagcttatatgccaactgaaattgaagttaaaagtgttagt
gaaaatgttgctaacattacagcgtatccttttgaggcgggttatgctgttactttggct
cacccattgcgtcgtcttctttacacaagtacggtaggttttgctcctattggtgtaaag
ataaaaggcgttagccacgaatttgacagtatgcgtggtatgctagaagacgtagctttt
tttattataaatttgaaaaagatcagatttaaattaaaaagcaccagtgagcgcgaagtt
atagagtatagctttaaaggaccaaaagagataaccggtgctgatttaaataatgatcta
gttgagatcgttaacccagatgcataccttgctacaataaatgaagatgctgagttaaat
ttttcagttatcattcaaaaaggtatcggatatgttcctagtgaagagatcagagaagag
atcgaagacgactatatcgcacttgatgctttttttacacctgttaaaaaagcagtttac
gatatacaaaatgtcttggttgaggatgatccagactatgaaaagatcgtatttactata
acaactgatggtcaagttagtccgatagaggcttttaaaaattgtttagaagctatgtat
caacaaatgtcagtatttaaaggaattttggatattgatgttagtactccagttgctagc
tcaagtacaggtggtgagttttcaaagttactttctagcgtagaagatctaaatttaagc
gctagaagtttcaactgccttgacaaagctgatattagatttatcggcgagcttgcatta
atggacgaaaatgagcttaaagagcttaaaaatttaggtaaaaaatctcttgaagagatt
aaagcggttatggaagagataggctatccagttggtgccgatgtgttaaaagatggcaaa
gagcaactaagaaagaaaataaccgagcttaaagcacaaatgagtgtaaaagaataa
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