Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
ccoe Corynebacterium comes
|
Brite |
KEGG Orthology (KO) [BR:ccoe00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:ccoe03032]
CETAM_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:ccoe03400]
CETAM_00025 (gyrB)
Enzymes [BR:ccoe01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CETAM_00025 (gyrB)
DNA replication proteins [BR:ccoe03032]
Prokaryotic type
DNA Topoisomerases
CETAM_00025 (gyrB)
DNA repair and recombination proteins [BR:ccoe03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CETAM_00025 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
5280..7340
|
AA seq |
686 aa
MANAENSYGASSITILEGLEAVRKRPGMYIGSTGPRGLHHLVWEVVDNSVDEAMAGHATK
VEVTLLADGAVQVLDDGRGIPVEMHPSGAPTVQVVMTQLHAGGKFDSDSYAVSGGLHGVG
ISVVNALSTRVEADIKRDGKHWIQNFNNSVPEELIEGGNARGTGTTIRFWPDAEIFETTH
FDYDTISRRLQEMAFLNKGLTITLKDERVTDTELELEALAEAGDTAEALDGSSFDDTEVE
VEKAPAGEAPKPPKKREKKVVYHYPDGLVDYVNHLNKGKTAIHPSIVGFEAKGTSHEVEI
AMQWNSGYKESVHTFANTINTHEGGTHEEGFRSALTSLMNKYALAHKLVKEKDPKLTGED
CREGLAAVVSVRVGEPQFEGQTKTKLGNTEIRSYVQRMVNEHVAFWFDANPAEAKAIVNK
AVSSSQARIAARKARELVRRKSATDLGGLPGKLADCRSKDPVVSELYIVEGDSAGGSAKA
GRDSMYQAILPLRGKILNVEKARLDRVLKNAEVQAIITALGTGINEEFDLSKLRYHKIVL
MADADVDGQHIATLLLTLLFRFMPDLIAEGHVFLANPPLYKLKWSKGEPGFAFSDDERDK
IIAEGLAAGRKINTNDGIQRYKGLGEMNPNELWETTLDPSERILRRVDLEDAQRADELFS
ILMGDDVAARRSFITRKAKDVRFLDV |
NT seq |
2061 nt +upstreamnt +downstreamnt
gtggcaaacgctgaaaacagttacggcgcgtcatcgatcacgattctcgagggcctcgaa
gcagtccggaagcgcccgggcatgtatatcggttcaacgggtccccgtggcctgcaccac
ctggtgtgggaggtcgtggataactcggtcgatgaggcgatggcgggtcacgcaaccaag
gttgaggtcaccctgctggctgacggcgccgtgcaggtgctggatgacggtcgtggtatc
ccggtggagatgcacccctcaggtgcaccgacggttcaggtcgtcatgacccagctgcac
gccggtggcaagttcgactccgattcctatgcggtctccggtggtctgcacggtgtgggt
atttccgtggtcaatgcgctgtcgacccgcgtcgaggccgacatcaagcgggacggcaag
cactggatccagaacttcaacaactccgtcccggaagagctgatcgagggtggcaacgcc
cgtggcacgggtacgacgatccggttctggccggacgccgagatcttcgagacgacccac
ttcgactacgacacgatctcacgtcgtctgcaggagatggcgttcctgaacaagggactg
accatcacgctcaaggacgagcgggtcaccgacacggagcttgagctggaggccctggca
gaggcgggcgacaccgccgaggctctcgacggttcgtccttcgatgacaccgaggtcgag
gtggagaaggccccggccggcgaggcgccgaagccgccgaagaagcgcgagaagaaggtc
gtctaccactacccggatggactggtcgactacgtcaaccacctgaacaagggtaagacg
gccatccacccgtccattgtgggcttcgaggcgaagggcaccagccacgaggtcgagatc
gcgatgcagtggaactccggttacaaggagtccgtccacaccttcgccaacaccatcaac
acccatgagggcggtacgcacgaggagggtttccgttcggcgttgacctccctgatgaac
aagtacgccctggcacacaagctggtcaaggagaaggacccgaagctcacgggcgaggac
tgccgcgagggtctcgcagccgtcgtgtccgtccgcgtgggtgagccgcagttcgagggc
cagaccaagacgaagctgggcaacacggagatccgttcctacgtgcagcgcatggtcaac
gagcatgtggccttctggttcgacgccaacccggcggaggccaaggccatcgtgaacaag
gcggtctcctcctcccaggcgcgcatcgcggcccgtaaggcgcgtgagctggtgcgccga
aagtcggcgacggacctgggtggactgcccggcaagctggcggactgtcgttccaaggac
cccgtcgtctccgagctctacatcgtggagggtgactcggccggtggctccgccaaggcc
ggccgtgattccatgtatcaggcgatcctgccgctgcgcggcaagattctcaacgtggag
aaggcccgtctggaccgcgtgctgaagaacgccgaggtccaggcgatcatcacggctctg
ggtaccggcatcaacgaggagttcgacctctcgaagctccgctaccacaagatcgtcctc
atggcggatgccgacgtcgacggccagcacatcgccaccctgctgctgaccctgttgttc
cgcttcatgccggatctgatcgctgagggtcacgtcttcctggccaacccgccgctgtac
aagctgaagtggtccaagggcgagccgggcttcgccttctccgatgatgagcgtgacaag
atcatcgcggaggggctggcggccggtcggaagatcaacaccaacgacggtatccagcgc
tacaagggtctgggcgagatgaacccgaacgagctgtgggagaccaccctcgacccgtcg
gagcgcatcctgcgccgcgtggacctcgaggacgcccagcgtgccgatgaactcttctcc
attctcatgggcgatgacgtcgcggcccgccgctccttcatcacccgtaaggcgaaggac
gtccgcttcctggacgtctag |