Corynebacterium comes: CETAM_02180
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Entry
CETAM_02180 CDS
T07879
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccoe
Corynebacterium comes
Pathway
ccoe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccoe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CETAM_02180 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccoe03021
]
CETAM_02180 (rpoC)
03400 DNA repair and recombination proteins [BR:
ccoe03400
]
CETAM_02180 (rpoC)
Enzymes [BR:
ccoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CETAM_02180 (rpoC)
Transcription machinery [BR:
ccoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CETAM_02180 (rpoC)
DNA repair and recombination proteins [BR:
ccoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CETAM_02180 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QGU03716
UniProt:
A0A6B8VYD8
LinkDB
All DBs
Position
434873..438883
Genome browser
AA seq
1336 aa
AA seq
DB search
MFDVNLFEELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEADMLLEKKDVEAEAESEIAERAAKLEED
LAELEAAGAKADARRKVQTAADKEMQYIRERAEREVVRLEEIWQTFIKLAPKQMIIDETV
YEELMDRYEDYFTGGMGAGAIQTLIRNFDLEAESEELHTIINEGKGQKKMRALKRLKVVA
AFLRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTMNKREDEIGGQ
GAYRPAGENGPATGDYSSFAEAIMARDRGVLGLQAPIRVRISHLRPPADVEAEQFPDGWE
QGQVWTAHTTLGRVMFNELLPWNYPYLEGVMVRKGGGTGFIMLGDVINDLAAKYPMITVA
QTMDKMKDAGFYWSTRSGVTIAMSDVLVLPNKEEILETYEAEAREIEHKFWVKGALRERD
RYDRLVELWQDATNKVGKAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTRQGVRVPVAVEIKGADGNVSGHSRHSLVETSVSGRVLATEVNGADGEVLFEAGADL
TESAIDELVARGINEVKVRSVLTCQTPTGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNASPIAEFSGTVALEDDGNFYKL
TLTSDDGNEEEIYEKLSKRQGLAQVKVPMDNNPSVFIERTLRDGDHVELGERLLRGPADP
HDVLRVLRRRGVEKHLIDEVQAVYRTQGVAIHDKHIEIIIRQMLRRGTVIDAGSTDFLPG
TLVDLTEARRINAAIRAEGGQPAELRDQIMGITKASLATESWLSAASFQETTRVLTDAAI
NKRSDQLIGLKENVIIGKLIPAGTGISRYRNIEVKPTEAARNAAYSIPTYGDSIYGDDGY
AEFTGASVPLDEEFQL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacgtaaacctcttcgaagagctccgcatcggcctggccaccgccgacgacatc
cgccgttggtccaagggcgaggtcaagaagccggagaccatcaactaccgcaccctcaag
ccggagaaggacggtctcttctgcgagcgcattttcggcccgacccgtgactgggagtgc
gcctgcggcaagtacaagcgagtccgttacaagggcatcatctgtgagcgctgtggcgtc
gaggtgaccaagtccaaggtgcgtcgtgagcgcatgggtcacatcgagctggccgcaccg
gtcacccatatctggtacttcaagggtgtcccgagccgtctcggctacctgctggacctc
gctccgaaggatctcgagcggatcatctacttcgccgcgaacatcatcacctccgtcgac
gaggaggcccgtcacaacgaccagtccaccctcgaggcggacatgctcctggagaagaag
gacgtcgaggctgaagccgagtccgagatcgccgagcgtgccgccaagctggaggaggac
ctcgccgagctcgaggccgccggcgccaaggctgacgcacgtcgcaaggtgcagactgca
gccgacaaggagatgcagtacatccgcgagcgtgcggagcgtgaggtcgtccgtctcgag
gagatctggcagaccttcatcaagctggctccgaagcagatgatcatcgacgagaccgtc
tatgaagagctcatggaccgctacgaggattacttcaccggcggcatgggtgccggtgcg
atccagaccctcatccgcaacttcgatctcgaggccgagtccgaagaactgcacaccatc
atcaatgagggcaagggccagaagaagatgcgcgccctcaagcgcctcaaggtcgtcgcc
gcgttcctgcgttccggcaacgacccggccggcatggtcctcgactgcatcccggtcatc
ccgccggagctgcgtccgatggtccagctcgacggtggccgcttcgccacctcggacctc
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgattgaactc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgca
ctgttcgacaacggtcgccgtggccgtccggtcaccggaccgggcaaccgtccgctgaag
tccctgtctgatctgctcaagggcaagcagggtcgcttccgtcagaacctgctgggtaag
cgtgtcgactactccggccgttccgtcatcatcgtcggtccgcagctgaagctccacgag
tgtggtctgcccaagctgatggccctcgagctgttcaagccgttcgtgatgaagcgactg
gtggagaacgactacgcgcagaacatcaagtccgcgaagcgcatggtcgagcgtcagcgc
cccgaggtctgggacgtgctggaagaggccatctccgagcacccggtgatgctcaaccgt
gcacccaccctgcaccgactgggcatccaggcgttcgagcccaagctcgtcgagggtaag
gccattcagctgcaccccctggcgtgtgaggccttcaacgccgacttcgacggtgaccag
atggcagtccacctgccgctgtccgctgaggcgcaggccgaggcacgcatcctcatgctc
gcctcgaacaacatcctgtccccggcgtccggtaagccgctggccatgccgcgtctggac
atggtgaccggtctgtacttcctcaccatgaacaagcgggaggacgagatcggcggccag
ggcgcataccgtccggccggcgagaacggtccggcaacgggcgactactcgtccttcgcc
gaggccatcatggcccgtgaccgtggtgtcctgggtctgcaggctccgatccgcgtgcgg
atctcccacctgcgtcccccggccgacgtcgaggcggagcagttccccgacggctgggag
cagggtcaggtctggaccgcgcacaccactctgggtcgcgtcatgttcaacgagctgctg
ccgtggaactacccgtacctcgagggcgtcatggttcgtaagggcggcggcacgggcttc
atcatgctcggcgacgtcatcaacgacctcgccgcgaagtacccgatgatcaccgtcgcg
cagacgatggacaagatgaaggacgcgggcttctactggtcgacccgttccggcgtcacc
atcgccatgtccgacgttctggtcctccccaacaaggaggagatcctcgagacctacgag
gccgaggcccgcgagatcgagcacaagttctgggtcaagggtgcgctccgtgagcgtgac
cgttacgaccgtctcgtcgagctctggcaggacgccaccaacaaggtgggtaaggccgtc
gaggacctgtacccggacgacaacccgattccgatgatcgtgaagtcgggtgccgccggt
aacatgcgccagatctggaccctggcaggcatgaagggcatggtggtgaactcgaagggt
gactacatcacccgtccgatcaagacctccttccgtgagggactgtcggttctcgagtac
ttcaacaactcccacggttcccgtaagggcctggcggataccgctctgcgtaccgccgac
tccggttacctgacccgtcgtctcgtcgacgtggcgcaggacgtcatcgtccgcgaggac
gactgcggcacccgccagggtgtccgcgtgccggtggcagtggagatcaagggcgctgac
ggcaacgtcagcggccactcccgccactcgctggtggagacctccgtgtccggtcgtgtt
ctggccaccgaggtcaacggtgcagacggcgaggtcctcttcgaggccggcgccgacctc
accgaatccgccatcgacgagctcgtggcccgtggcatcaacgaggtcaaggtccgctcc
gtgctgacctgccagaccccgaccggtgtctgcgcgaagtgctacggcaagtccatggcc
tccggccagctggtggacatcggcgaggccgtcggcatcgtcgccgcccagtcgatcggt
gagccgggtacccagctgaccatgcgtaccttccaccagggtggtgtcggtggtgacatc
accggcggtctgccgcgtgtgcaggagctgttcgaggcccgcgtgccgaagaacgcctcc
ccgatcgcggagttctccggcactgtcgcgcttgaggacgacggcaacttctacaagttg
acgctgacctccgacgacggcaacgaggaggagatctacgagaagctgtccaagcgacag
ggtctcgcccaggtcaaggtcccgatggacaacaacccctcggtgttcatcgagcgcacc
ctgcgcgacggtgatcacgtggaactcggcgagcgcctgctccgcggccccgccgacccg
cacgacgtgcttcgcgtgctgcgccgccgcggcgtcgagaagcacctcatcgacgaagtg
caggccgtgtaccgcacccagggtgtggccatccacgacaagcacatcgagatcatcatc
cgccagatgctgcgtcgcggcaccgtcatcgacgccggttccaccgacttcctgccgggc
accctggtcgacctcaccgaggcacgccgcatcaacgcggcgatccgtgccgagggtggt
cagccggcggagctgcgcgaccagatcatgggcatcaccaaggcctcgctggccacggag
tcctggctctcggccgcctccttccaggagacgacccgtgtgcttaccgacgccgcgatc
aacaagcgctccgaccagctcatcggtctcaaggagaacgtgatcatcggtaagctgatc
ccggccggtaccggtatctcccgttaccgcaacatcgaggtcaagcccaccgaggcggcc
cgcaacgcggcctactcgatcccgacctacggtgactccatctacggtgatgacggctac
gccgaattcaccggtgcctccgtgccgctggacgaggagttccagctctag
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integrated database retrieval system
