KEGG   Corynebacterium comes: CETAM_03330
Entry
CETAM_03330       CDS       T07879                                 
Symbol
uvrD1
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ccoe  Corynebacterium comes
Pathway
ccoe03420  Nucleotide excision repair
ccoe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccoe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CETAM_03330 (uvrD1)
   03430 Mismatch repair
    CETAM_03330 (uvrD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccoe03400]
    CETAM_03330 (uvrD1)
Enzymes [BR:ccoe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CETAM_03330 (uvrD1)
DNA repair and recombination proteins [BR:ccoe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CETAM_03330 (uvrD1)
   MMR (mismatch excision repair)
    Other MMR factors
     CETAM_03330 (uvrD1)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: QGU03946
UniProt: A0A6B8VZ31
LinkDB
Position
663776..667030
AA seq 1084 aa
MPDIPAPKVSPELLSAWLGQDHRPTPQQSEIIGAAPGPLLVVAGAGAGKTETMAARVVWM
VANRYVTPDQILGLTFTRKAAQELGTRIRRRLQVLAGTPKVRDLDPTGELLHDLLHLAPT
VSTYDAYAAQLVREYGLLVPVEPTGRMITAAELHGIAHRVVSDYRGHHSATGQVATVTER
LLSLITEMGNAVADEQTVIEESLAFINELESLPPYGKKNPPDYFTKDQQKWLKAQKERID
YFPLVHELRAELSRLGVTTFNEQMSVAARLASTHESVGASQRRRFKVIMLDEYQDTSHSQ
RVLLSSLFGGGHEDLTVTAVGDPMQAIYGWRGATAENLREFVNDFPAGASAAPKKQLTTS
WRNPPEVLSLANAVSDKLLGTGTGREVESLVPRPDAPVGDVALGYFATKEDEIDFVADRL
AEEFLAKQQAKEDASAVRDPEARKKALKKATFTGAVLVRKNKHTADIAHALETRGIPYEI
FGIGGLLTLPEIADLVAIATMLIRPQNAPAALRILAGPSVGLGLADLVALRDRARNLTGG
DRTRMIVDETLEPEDRLRAQLAALVADPPEQVAGLTDAVADLGERSRYSPEGVRRLESLS
SRLRHLRMNSLSKSLPDLFNDIVDVFGIRTEVLSRPGSTGAVNLDTFLDSVASYPGDSLR
GLLDYFDLAREHEDGLSPGEATVKDERVQILTVHKAKGLEWDMVCVLHADKATYKGNTET
FLTRSERIPDAEVDTLDAENRRDFAKAYTAYKDEKKQELAEENARLFYVAVTRSERILTV
TASPSGQYPGPYEHHETLKELAPESVVAWEVDQTDVEGREREPETGIFPSLHPDPQAQSG
ADLVRAAMAELPAAVAGETFEFWEAETNALIAEHEAMLAPVVEVELPGELTATDLVALRQ
DPVQFARRQRRPVPFKPNQFAKRGTAFHQWLEDRFGATALLDEDQLPGIDEEDVDAGDLA
HLKDVFLSSPWAERTPEFVEQPFEVSIGDVVVRGRMDAVFRDPENPEGWFIVDWKTGRPP
GGPERRAAIIQLAVYREAWRRINGDAPVRAAFHYVGWNETLEPRDLPGHDELVGLLEHAV
VEKQ
NT seq 3255 nt   +upstreamnt  +downstreamnt
atgcctgacatccccgccccgaaggtatccccggaacttctctctgcatggctcgggcag
gatcaccggccgaccccgcagcagtcggagatcatcggcgcagcaccgggccctctcctg
gtggtggccggtgctggtgcaggcaaaaccgagacgatggccgcccgcgtggtgtggatg
gtggccaaccgctacgtcaccccggaccagatcctcggtctcaccttcacccggaaggct
gcgcaggagttgggtacccgtatccgacgtcgtctgcaggtgctggcaggcaccccgaaa
gtcagagatctggatcccaccggggaactcctccatgatctgctccacctcgcccccacg
gtgtccacctacgatgcctacgcggcgcaactcgtgcgcgagtacggccttctcgtaccg
gtcgaaccgaccggtcggatgatcacggcggcggaactccacggcatcgcccaccgggtg
gtgtccgactaccggggacaccattcggctacggggcaggtcgccacggtgacggaaaga
ctgctcagcctcatcaccgaaatgggcaatgcggtcgcggacgaacagacggtcatcgag
gagtccctcgcgttcatcaacgagctggagtccctgccgccctacggcaagaagaaccca
cccgattacttcaccaaggaccagcagaagtggttgaaggcgcagaaggagcgcatcgac
tacttccccctggtccatgaactccgcgcggaactctcccggctcggtgtgaccaccttc
aacgagcagatgtccgtggctgcccgtctggcgtccacccacgagtcggtgggggcgtcg
caacggaggcgtttcaaggtcatcatgctcgacgaataccaggacacctcccattcgcag
cgcgtcctgctgtccagccttttcggtgggggccacgaggacctgaccgtcacggccgtc
ggcgacccgatgcaggcgatctacggctggcgtggagcgacggcggagaacctccgggag
ttcgtcaacgacttccctgcgggagcgtccgctgcgccgaagaagcagctgaccacgtcc
tggcgtaacccgccggaggtgctcagcctggccaacgcggtctcagacaagctgctgggg
accggaaccggccgggaggtggaatctctggtcccgcgtccggatgcacctgtgggtgac
gtcgccctcggctacttcgcaacgaaggaggacgaaattgacttcgtcgccgatcggctg
gcggaggagttcctcgccaagcagcaggcgaaggaggacgcttcggcggtgagggatccc
gaggcgcggaaaaaagcgctgaagaaagccaccttcactggtgcggtgctcgtacgaaag
aacaagcacaccgcagacatcgcccacgccctcgagacccgtggcatcccctacgaaatc
ttcggaatcggggggctgctcaccctgccggagatcgctgatctggtggccatcgccacc
atgctcatccgcccgcagaacgccccggccgccctgcgcatcctcgccggcccctccgtg
gggctgggcctcgccgacctcgtcgccctccgcgaccgcgcccgcaacctcaccggcggg
gacaggacgaggatgatcgtcgacgagaccctggaacccgaggaccggctgcgggcccag
ctggcggcactggtggcggacccgcccgagcaggtcgcggggctcaccgatgcggtggcg
gatctcggggaacgctcccgctattcccccgagggcgtgcgccgtctggagtccctctcg
tcgcgcctgcggcacctccgcatgaacagcctgagtaagtcgctgccggatctgttcaat
gacatcgtcgatgtcttcggcatccgtaccgaggtgctctcccgacccgggtccaccggg
gcggtgaacctggacaccttcctcgacagcgtcgcctcctatccgggcgacagcctgcgc
ggcctgctcgactacttcgacctggcccgcgagcatgaggacggcctctctccgggtgaa
gcgaccgtcaaggacgaacgcgtgcagatcctcaccgtgcacaaggccaagggcctcgag
tgggacatggtgtgcgtcctgcacgcggacaaggccacctacaagggcaacaccgagacc
ttcctcaccaggtcggagcggatcccggacgcggaggtggacaccctcgatgccgagaat
cggcgggacttcgccaaggcctacaccgcgtacaaagatgagaagaagcaggaactcgcg
gaggagaacgcccggctgttctatgtggcggtcacccgctcggagcggatcctcaccgtc
accgcctcgccgtccggccagtatcccggcccttatgagcaccacgaaaccctgaaggag
ctggccccggaaagcgtggtggcgtgggaggtggatcagacggacgtcgaagggcgggag
cgggaacccgagaccgggatcttcccctccctgcaccccgacccgcaggcacagtccggc
gcggatctggtgcgtgcggcgatggccgagctgcccgcggcggtggcgggtgagaccttc
gagttctgggaggcggagaccaacgcgctgatagcggagcacgaggcgatgctggcgccg
gtcgtcgaggtggagctgccgggcgagctcacggcgactgacctggtggcgttgcggcag
gatccggtgcagttcgcgcgccgtcagcgtcggccggtgcctttcaaaccgaaccagttc
gccaagcggggcaccgcgttccaccagtggctggaggaccgtttcggggcgaccgccctg
ctggacgaggatcagctgcccggtatcgacgaggaggacgtcgacgccggcgatctggcg
cacctcaaggacgtcttcctcagcagcccgtgggcggaacgcacaccggagttcgtggag
cagcccttcgaggtctcgatcggcgacgtcgtggtgcgtggccggatggacgcggtgttc
cgtgacccggagaatccggagggctggttcatcgtcgactggaagaccggccgaccgccg
ggcggcccggagcggcgggcggcgatcatccagctggcggtgtatcgcgaggcgtggcgg
cgcatcaacggggatgctccggtgcgcgccgcgttccattatgtcggctggaacgagacc
ctcgagccacgtgacctgcccggccatgatgaactggtcggattgctggagcacgcggtc
gtcgaaaagcagtag

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