Entry |
|
Symbol |
uvrD3
|
Name |
(GenBank) ATP-dependent DNA helicase UvrD1
|
KO |
|
Organism |
ccoe Corynebacterium comes
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ccoe00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CETAM_03715 (uvrD3)
03430 Mismatch repair
CETAM_03715 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:ccoe03400]
CETAM_03715 (uvrD3)
Enzymes [BR:ccoe01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CETAM_03715 (uvrD3)
DNA repair and recombination proteins [BR:ccoe03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CETAM_03715 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
CETAM_03715 (uvrD3)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
748485..750851
|
AA seq |
788 aa
MNSPFTQPSTDLTLGLNEQQKAAVEHEGSPLLIVAGAGSGKTAVLTRRIAHLMRNRGVAP
WEILAITFTNKAAAEMRERVSGLVGPVAERMWVATFHSVCVRILRQQAQLVPGLNTNFTI
YDSDDSRRLLSMIAKDHNLDLKKFTARVLANAISNLKNELITPAEARAEAEVTRAPFELT
VAEVFGDYQRRLRSSNAVDFDDLIGEVVRIFQEHPQVTDHYRRRFRHVLIDEYQDTNHAQ
YMLISTLVGKGPDAPELCVVGDSDQSIYAFRGATIRNIEEFERDYPQARTILLEQNYRST
QTILNAANSVIARNDGRREKKLWTALGDGQQIIGYVADNEHDEARFIAGEIDALVDKGAT
YSDVAVMYRTNNASRALEDVFIRAGIPYKVVGGTRFYERREIRDIVAYLRILENPDDTVS
LRRIINTPRRGIGDRAQAFIALQAQNNAVSFGAALMDAVDDKIPLLGARGRNAVVKFVAM
MDTLRAEIPSMVNEVTGMPDLGELISRVLDITGYRAELEASNDPQDGARLDNLNELVSVA
REFSSEAANQVAYAEMDGGEFEPEEGDPEPGSLQAFLEKVSLVADADQLPDNEQGVVTLM
TLHTAKGLEFPVVFLTGWEDGQFPHLRALGDPKELAEERRLAYVGITRAREQLYITRAML
RSSWGNAVTNPPSRFLGEVPEELLEWRREEPENSWSGSWGGGGGSRSGSWGQPAQRSAMP
KKPTLPKARSANSNLQLAVGDRVNHDKYGLGKVIASDGSGARATVTIDFGSSGKVRLMLI
GGVPMEKL |
NT seq |
2367 nt +upstreamnt +downstreamnt
atgaattcgccgtttacacagccgtccactgatctcaccctcggtctcaatgagcagcag
aaggccgccgttgaacacgagggttcccccctgctcatcgtggctggtgcgggctccgga
aagaccgcagtgctcacccggaggatcgcccacctcatgcgcaaccggggagtcgccccc
tgggagatcctcgccatcacgttcacaaacaaggcggccgccgagatgcgcgagcgcgtc
tccggactggtgggtccggtggcggagcggatgtgggtggccacgttccactcggtgtgt
gtgcggatcctgcggcagcaggcacagctggttccggggttgaacaccaatttcaccatc
tatgactcggatgattcgcgtcggctgctcagcatgatcgcgaaagaccacaacctcgac
ctgaagaagttcaccgcccgagtgctggccaacgcgatctcgaacctgaagaacgagctc
atcaccccggcggaggcgcgggcggaggcagaggtcacccgtgcccccttcgaactcacc
gtcgcggaggtgttcggcgactaccagcggcgcctgcggtcgtcgaatgccgtggacttc
gacgacctcatcggtgaggtggtgcgcatcttccaggagcacccgcaggtgacggatcat
taccgccgccgcttccgtcacgtcctcatcgacgagtatcaggacaccaaccacgcgcag
tacatgctcatctccacactcgtggggaagggcccggacgccccggagctgtgcgtggtg
ggcgattctgaccagtcgatctacgcattccgtggcgcgacgatccgcaacatcgaggag
ttcgagcgggactatccgcaggcccggacgatcctgctggagcagaactaccgctcgacc
cagacgatcctcaacgccgccaactccgtgatcgcgcgcaatgacgggcgccgggagaag
aagctgtggaccgcgctcggtgacggccagcagatcatcggttacgtggcggacaatgag
catgatgaggcacgcttcatcgccggcgagatcgacgcgctcgtcgacaagggggcgacc
tactccgatgtcgcggtgatgtaccggacgaacaacgcgtcgcgcgcgctggaggacgtg
ttcatccgtgcgggcatcccgtacaaggtggtcggcggtacccgcttctacgagcgccgc
gagatccgtgacatcgtcgcctatctccgcatcctggagaacccggatgacacggtgagt
ctgcggcggatcatcaacaccccgcgccggggcatcggtgacagggcacaggccttcatt
gcgctgcaggcgcagaacaacgcggtctccttcggcgcggcgctgatggacgccgtcgac
gacaagattcccctcctcggtgccagaggccggaacgcggtggtgaagttcgtcgcgatg
atggacaccctgcgtgcggagataccgtcgatggtcaacgaggtcacgggtatgccggat
ctgggcgaactgatttcccgggtgcttgacatcaccggttaccgggcagaactggaggcg
agcaatgacccgcaggacggggcacgcctggacaacctcaacgagctggtgtcggtggcc
cgcgaattttcctccgaggcggcgaaccaggtcgcctacgcggagatggacggcggcgag
ttcgagccggaggagggtgatccggagccggggtcgctgcaggcgttcctggagaaggtc
tcgctggtggcggacgcggaccagctccccgacaacgagcagggcgtggtcaccctgatg
accctgcacaccgcgaaggggctggaattcccggtggtgttcctcaccggttgggaggac
ggacagttcccgcacctgcgtgcgctgggagatccgaaggagctggcggaggagcggcgc
ctggcctacgtgggtatcacgcgggcccgggagcagctgtacatcacccgggcgatgctg
cgttcctcgtggggtaacgcggtgaccaacccgccgagccgcttcctcggtgaggtgccg
gaggagctgctcgagtggcgtcgtgaggagcccgagaactcctggtccggttcctggggc
ggtggtggcgggtcccggtcgggttcctggggccagcccgcgcagcgcagtgcgatgccg
aagaagccgaccctgccgaaggcccgcagcgccaacagcaatctgcagttggcggtgggg
gaccgggtcaaccacgacaagtatgggctgggcaaggtcatcgcatccgacggatcgggg
gccagggccacggtgaccattgacttcggttcctcgggcaaggtgcggctcatgctgatc
ggcggagtgccgatggagaagctctag |