Corynebacterium comes: CETAM_05190
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Entry
CETAM_05190 CDS
T07879
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ccoe
Corynebacterium comes
Pathway
ccoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CETAM_05190 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoe03019
]
CETAM_05190 (deaD)
03009 Ribosome biogenesis [BR:
ccoe03009
]
CETAM_05190 (deaD)
Enzymes [BR:
ccoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CETAM_05190 (deaD)
Messenger RNA biogenesis [BR:
ccoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CETAM_05190 (deaD)
Ribosome biogenesis [BR:
ccoe03009
]
Prokaryotic type
rRNA helicases
CETAM_05190 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
Cas3-like_C_2
AAA_22
adh_short
Motif
Other DBs
NCBI-ProteinID:
QGU04309
UniProt:
A0A6B8VMI6
LinkDB
All DBs
Position
1053087..1055330
Genome browser
AA seq
747 aa
AA seq
DB search
MVFWLEVAYSDQAMSNSDIATGGANEPDDMNLSESQNNPQGEAAQAASASTGPLTVEDLI
DPDVPAQADQDTRDADTSEAADSRTDNQVQDSAENDNTAEADKNEASEEKGEGNGFDNLG
LPDAVLRAVKKVGYETPSAIQAQTIPVLMEGNDVVGLAQTGTGKTAAFALPVLARIDIED
RSPQALVLAPTRELALQVADSFQSFADHLGKISVLPIYGGQAYGIQLSGLRRGAQIIVGT
PGRVIDHLEKGTLDISRLRFLVLDEADEMLNMGFQEDVERILRDTPSEKQVALFSATMPN
GIRRISKQYLNDPHEITVKTETRTSTNITQRFLNVAHRNKLDAITRILEVTEFDAMIVFV
RTRHETEEIAEKLRARGFSAAAINGDIAQAQRERTIDQLKDGRLDILVATDVAARGLDVD
RISHVFNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMVRAIERATNAPLTEME
LPSVDDVNEARKAKFADTITEALESQQLDVFRKLIKRYAEEKDVPLEDVAAALAAQAQAG
SDFLMKDLPPERRRERTDRDDRGSRDRDRGERREGGRFEDRGERRERAPRSDRDGDFTTY
RLAVGKRQNVRPGAIVGALANEGGLSSKDFGRITIATDHTLVELPKDMDPSVLGRLSATR
ISGQLINIEADSGAVHPPRGGGDRGGDRGGFRGGDRGGYRGGRDDRGGDRGGDRGGFRGA
RDDRGGFRGGRDDRGGDRGGRSGGWRD
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggtcttttggctcgaagtcgcgtactctgatcaggcaatgagcaacagtgatatcgct
accggcggcgcaaacgagccggatgacatgaatctgtcggaatcacagaacaacccgcag
ggtgaagcagcgcaggctgcatccgcctccaccgggccgctgacagtcgaggatctgatt
gatcccgacgtcccggctcaggcggatcaggacaccagggacgcggatacttctgaggct
gccgactccaggaccgacaaccaggtccaggacagcgctgaaaatgacaacactgcagaa
gcagacaagaacgaagcctcagaggagaagggtgagggcaacgggttcgacaacctgggc
ctccccgacgcagtcctccgtgcggtgaagaaggtgggttacgaaaccccctccgcaatt
caggctcagaccattcccgtcctcatggagggcaacgatgtggtcggtctcgcacagacc
ggcaccggcaagacggctgcgttcgcgctgccggtcctggcccgcatcgacatcgaggac
cgttcgccgcaggcgctggtcctcgcaccgacccgagagctcgcgctccaggtcgccgat
tccttccagtccttcgcggatcacctgggcaagatcagcgtcctgccgatctacggtggc
caggcctacggcattcagctgtccggtctgcgtcgcggcgcccagatcatcgtgggtacc
ccgggtcgtgtcatcgaccacctggagaagggcaccctcgacatctcccgtctgcgtttc
ctcgtcctcgacgaggccgacgagatgctcaacatgggcttccaggaggatgtcgagcgc
atcctgcgggacaccccgagcgagaagcaggtcgcactgttctcggcgacgatgcccaac
ggcatccgtcgcatctccaagcagtacctgaatgacccgcacgagatcacggtcaagacc
gagacccggaccagcaccaacatcacgcagcgcttcctcaacgtcgcgcaccgcaacaag
ctggacgcgatcacccgcatcctcgaggtcaccgagttcgacgccatgatcgtgttcgtg
cgtacgcgccacgagaccgaggagatcgccgagaagctgcgcgcccgtggattctccgcg
gccgccatcaacggtgacatcgcccaggcacagcgtgagcgcacgatcgatcagctcaag
gacggtcgcctggacatcctggtcgccaccgacgtcgccgcccgcggccttgacgtcgat
cgcatcagccacgtgttcaacttcgacatcccgaatgacaccgagtcctacgtccaccgc
atcggccgcaccggccgtgcaggccgttccggcgaggcgatcctcttcgtcaccccgcgt
gagcgccgcatggtgcgtgccatcgagcgcgccaccaacgcaccgctcaccgagatggag
ctgccttccgtggacgacgtcaacgaggcccgcaaggccaagttcgccgacaccatcacc
gaggctcttgagtcccagcagctggacgtgttccgcaagctgatcaagcgttacgccgag
gagaaggatgtcccgctggaggacgtcgccgcagccctggctgcacaggcccaggccggc
tccgacttcctgatgaaggacctgccgccggagcgtcgccgcgagcgtaccgaccgcgac
gaccgtggcagccgtgaccgcgatcgcggtgagcgccgtgaaggtggtcgcttcgaggac
cggggcgagcgccgtgagcgtgccccccgttccgaccgtgacggtgacttcaccacctac
cgccttgcggtgggcaagcgtcagaacgtccgcccgggtgccatcgtcggcgccctggcc
aacgagggtggcctgtccagcaaggacttcggccgcatcaccatcgccaccgaccacacc
ctggtcgagctgcccaaggacatggatccctccgtcctcggccgtctgtccgcaacccgg
atctccggtcagctcatcaacatcgaggccgactccggtgccgtccatccccctcgtggt
ggtggcgaccgtggcggtgaccgtggcggtttccgcggcggcgatcgtggtggataccgc
ggcggccgtgatgaccgcggtggcgaccgtggcggtgaccgtggtggtttccgcggcgcc
cgtgatgatcgtggtggtttccgcggcggccgtgatgaccgcggtggcgaccgtggcggc
cgctccggcggctggcgcgactag
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