Entry |
|
Symbol |
rng
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Name |
|
KO |
|
Organism |
ccoe Corynebacterium comes
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ccoe00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CETAM_10125 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ccoe03019]
CETAM_10125 (rng)
03009 Ribosome biogenesis [BR:ccoe03009]
CETAM_10125 (rng)
Enzymes [BR:ccoe01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CETAM_10125 (rng)
Messenger RNA biogenesis [BR:ccoe03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CETAM_10125 (rng)
Ribosome biogenesis [BR:ccoe03009]
Prokaryotic type
rRNA processing factors
CETAM_10125 (rng)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(2102605..2105799)
|
AA seq |
1064 aa
MAESTEPTENANAGNVEKDALKKRRSTRKTTRKTTRREPAPENEQRPEAELRPELDPLLL
ENKVRVHVLAKALGRTSKELAETAAGLGLKKVAQSTLTPQEARQIVEALLPPVSQPGQAP
TPEPETGEEPRDEDEIRTRVRKNVANEISQIEERVDADLAVLVHEQPEDELLEDVTPEIT
PMPTEQPIVEQFAPLFMAPGTEPVADEAEEDADSSASRRRRRGRRGVGRGRGAEEQQEQD
AIEDEAEVAVEIAVEVADEDEQDDVDTQAHEEELPDEPVALKGSTRLEAQRRRRTEMREE
GRRKKHIVSQAEFLARRESVARTMVVRERQRHDHPGLVTQVGVLEDDLLVEHFVTSETQA
SMIGNIYLGRVQNVLPSMEAAFIDIGKGRNGVLYAGEVDWKSTGLGGRGRRIEQALKSGD
QVLVQVSKDPVGHKGARLTTQISLAGRYLVYVPGGRSAGISRKLPGPERKRLKEILGRVV
PGQGGAIIRTAAENVPEEAIAADVDRLHRLWEDIQDRADRELNARGSKPITMYEEPDMLV
KVIRDLFNEDFTSLTVDGDRAWNTVHAYVKSVAPDLLDRLQRYNRNDNGGQDAFEQYRVD
EQLQKALNRKVWLPSGGSLVIDRTEAMIVVDVNTGKFTGSGGNLEETVTRNNLEAAEEIV
RQMRLRDLGGMIVVDFIDMVLPENQELVLRRLKEALGRDRTRHQVSEVTSLGLVQMTRKR
LGTGLLETFSTECEHCNGRGLILHEDPVEEPVEFEDRPRRSPAKPEPAPTRHPVVVAIKR
EDEAVDIEELAAAVVITPDEDEQESDSRRRRSRRGRRGTSRGRAAESPEVLEVPEAPEVP
QASDIEAIVSAAIERADELDPEEPSGADYVLAARSGEKTFQQAMAEFESSPRRRRRTRGH
SRSDHRPKPEDFPGSAATGPVAKAEETMIKVQEEREETPTGTEQASSRSRGRRRVSRSAR
GEQAQQDQQDQQAGRPEPQQPVEDVAEEKSHRNSPSEVSSGAPTRTRGRRRAVRRTTTAA
EEAPQVRDEVREQRPERKQDVPEGGVEKRTTRGRRRVTRRSSTR |
NT seq |
3195 nt +upstreamnt +downstreamnt
gtggctgaatccaccgaacccaccgagaacgccaacgcagggaacgtcgagaaggacgcg
ctgaagaagcgccgctcgacacgcaagaccacacgcaagaccacccgcagggaacccgcg
ccggagaatgagcagcgcccggaggctgagctgcgcccggagctggatcccctgctgctg
gagaacaaggtgcgcgtgcacgtactggccaaggcgctgggcaggacctcgaaggagctc
gcggagacggccgccgggctggggctgaagaaggtcgcgcagtcgacgctcacccctcag
gaggcacgtcagatcgtcgaggcgctcctgccgcccgtttcacagccggggcaggcgccc
accccggagccggaaaccggcgaagagccccgggacgaggatgagatccggacccgtgtg
cgcaagaacgtggccaacgaaatctcccagatcgaggagagggtcgacgctgacctggcc
gtgctcgtgcacgagcagccggaggatgagctgctcgaggacgtgaccccggagatcacg
ccgatgccgacggagcagcccatcgtcgaacagttcgcaccgttgttcatggcgcccggc
acggagcccgtggcggatgaggctgaggaggacgcggactcgagcgcttcccgacgccgt
cgtcgtggccgccgcggcgtcggccgcggccgcggtgcggaggagcagcaggaacaggac
gcgatcgaggacgaagccgaggtcgccgtcgagatcgcggtcgaggtcgcagacgaggac
gagcaggacgacgtcgatacgcaggcgcacgaggaggagcttccggatgagcccgtcgcc
ctcaagggctcgacgcggctggaggcgcagcgtcgccgacgcacggagatgcgtgaggag
gggcgccgcaagaagcacatcgtctcccaggcggagttcctggcacgccgggagtcggtg
gcccgcaccatggtggtccgcgaacggcagcggcacgatcaccccggtctggtgacccag
gtcggtgtgctggaggatgacctgctggtcgagcatttcgtgaccagcgagacgcaggcc
tcgatgatcggcaacatctacctcgggcgcgtgcagaatgtgctgccgagcatggaggcg
gcgtttatcgacatcggcaaggggcgcaacggtgtgctctacgccggtgaagtcgactgg
aagtccacgggcctgggtgggcgcggccgtcgcatcgagcaggccctgaagtccggcgac
caggtgctcgtgcaggtgagcaaggatccggtggggcacaagggtgcgcgtctgaccacc
cagatctcgctggccggccgctacctggtgtacgtgccgggtgggcgcagcgcgggcatc
tcccggaagctgcccgggccggagcgcaagcgtctcaaggagatcctcggccgtgtggtg
cccggtcagggtggcgcaatcatccgtaccgccgccgagaacgtgccggaggaggccatc
gccgcggacgtggaccgcctgcaccgtctgtgggaggacatccaggaccgcgcggacagg
gagttgaacgcccgcggctccaagcccatcaccatgtacgaagagccggacatgctggtc
aaggtgatccgtgacctcttcaacgaggatttcacctccctcacggtcgacggcgaccgt
gcctggaacaccgtccacgcctacgtgaagtccgtcgcccctgatctgctggaccgtctt
cagcgttacaaccgcaacgacaacggcggccaggacgctttcgagcagtaccgcgtggac
gagcagctgcagaaggcactcaaccgcaaggtgtggctgccctcggggggctcgctggtg
atcgaccgcaccgaggcgatgatcgtcgtcgacgtcaacaccggcaagttcaccggctcc
ggcggcaacctcgaggagaccgtcacccgcaacaacctggaggcggccgaggagatcgtc
cgccagatgcgtctgcgcgacctgggcggcatgatcgtcgtcgatttcatcgacatggtc
ctgccggagaaccaggagctggtgctgcgccgcctcaaggaggcgctcggccgggaccgc
acccgccatcaggtttccgaggtcacctccctcggcctcgtgcagatgacccgcaagcgc
ctgggcaccggtctgctggagaccttctccaccgaatgtgagcactgcaacggccgtggc
ctgatcctgcacgaggacccggtcgaggagccggtcgagttcgaggaccgtccgcgtcgt
tcacccgcgaagcccgaaccggcgcccacccgccacccggtggtcgtggccatcaagcgc
gaggatgaggccgtcgacatcgaggagctcgccgcagccgtggtgatcacccccgatgag
gatgagcaggagtctgattcccgccgccgccgttcccgccgcggccgccgcggcaccagc
cgtggccgcgcagccgagtcgccggaggtgctggaggtgcctgaggcgcctgaggtgccg
caggccagcgacattgaggcgatcgtctccgccgccatcgaacgtgcggatgagcttgat
ccggaggagccctccggcgccgactacgtgctggccgcgcgatcgggtgagaagaccttc
cagcaggcgatggccgagttcgagtcgtccccgcgccgccgccgtcgcacccgcggtcac
tcccgctcggaccatcgcccgaagccggaggatttccccggttccgccgccaccggcccg
gtggccaaggcggaggagaccatgatcaaggtccaggaagagcgcgaggagacgccgacc
ggcaccgagcaggcctcatcccgcagccgcggtcgtcgccgtgtcagccgcagtgcccgt
ggcgagcaggcccagcaggaccagcaggaccagcaggccggccggcccgagccgcagcag
ccggtggaggacgtggcggaggagaagtcgcaccgtaacagcccctcggaggtctcttcc
ggtgcgccgacccgcacccgcggacgacgacgtgcggtacgccgcacaacgacggcagcg
gaggaggctccgcaggtcagggatgaggtccgggagcagcgtccggagcggaagcaggac
gtgccggagggcggcgtcgagaagcggacgacgcgtggccgacgacgcgtgaccaggcgc
agcagcacccgttaa |