Corynebacterium comes: CETAM_11680
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Entry
CETAM_11680 CDS
T07879
Symbol
lgrD
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
ccoe
Corynebacterium comes
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
PP-binding
Hexapep
Hexapep_2
AMP-binding_C
Phage_base_V
DUF6332
Motif
Other DBs
NCBI-ProteinID:
QGU05568
UniProt:
A0A6B8WFX6
LinkDB
All DBs
Position
2425331..2429224
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AA seq
1297 aa
AA seq
DB search
MTLHNVPRQFLRAAEAPAKRTLYDILAATAAEYPEAAAIDDGEILTYAELMDEVHALAAE
LHANGIRRGDRIGIRMTSGSRDLYIAILATIAAGAAYVPVDADDPEERAEMVFSEGNING
VFTDEGFRMLSPRAGGDKHRPQLGDTAWIIFTSGSTGKPKGVAVSHRSAAAFVDAEAQLF
LVNSPGGPLGPEDRVLAGLSVAFDASCEEMWLAWRHGACLVPAPRSLVRSGMDLGPWLIR
RDITVVSTVPTLAGLWPAEALDNIRLLIVGGEACSQELVERLATEDREMWNTYGPTEATV
VASATQLYPDHPVGIGLPLAGWDLLVVDEQDQPVEVGQVGELVIGGVGLARYLDPEKDAE
KYAPMPTVGWPRAYRSGDHVRLEEDGLYFIGRVDDQVKIGGRRIELGEVEANVAALPNVY
NSAVAVQKTGANQSVLVGYVSLDDPEIDFDHEAAHQRLAETMPAALVPRICVMEELPIRT
SGKVDKKALPWPLPGVGVEATDLNPTETWLAELWVDVLGTSVADADSDFFTLGGTSLAAA
TLVGRIRRQVPTVAVRDLYDHPRLGSLAEAVESIAKKSGVSLVDTTPVEPRVVRPVGAGT
RLAQLLIQVPMMTLQATTWLGWILLGGNLARLAGVEWAVHTSWWLIAFLLVVFGSPVGRL
PLGGLGARLLTAGIRPGDYRRGGATHLRIWAAERWAEASGSHSISGATWVIYYARSLGVK
IGRGVDLHSLPPVTGLLTLGDHSAIEPEVDMSGYWVDGDILRVGAIDVGSQARVGARSTL
LPGTVIGADAHVEAGSTVTGGRPVKPGARWSGSPAEKVGRSKHRFPDEHPPRRTRWVPIY
GLTSLLLSLQPLVAIALGGLVVLTLVQYTDGNPLLGGVVFAPLGGLVAFAFYMVATWLGV
RLLSLGLKPGVTPVRSFHGWQLWTIERLMDDARTYLFPLYAGQLTPMWLRSLGAKIGRDV
EVSTAVMVPKLTEVRDGAFLADDTLIGGYELGGGWMLTGETRVGKRSFVGNSGITGPGRK
LPKNSLVAVLSSTPKKAKANTNWWGSPPERMRRVLVDAGGGEALTYNPGLKVKVFRGFIE
TMRLLAPMVSAMLLAAVVGTLYWLTVNVGVWAAWLAGGVTLMVAGLVAMVITVLVKWFCV
GKHRPGDHPLWSEFVWLNELQDAFVESVAGPWFLQHNLGAGELNVALRALGVRIGRGAWI
ETYWFPETDLCVVGRGASVGPGTVVQTHLFQDRVMSLDYVTIGDGATLAAHSVALPAATL
GEGATVGPGSLVMRGDQVPANTVWQGNPIEPWTGVKS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgaccctccacaatgttccccgccagttcctccgtgccgccgaagcccccgccaaacgc
acgctctacgacattctcgccgccaccgccgccgagtaccctgaggcagccgccatcgac
gacggcgagatcctcacctacgcggagctcatggacgaggtgcacgcactagcggccgaa
ctgcacgccaacggcatccgtcgcggtgaccgcatcggcatccggatgacctcaggcagc
cgtgacctctacatcgccatcctcgccaccatcgccgccggcgcggcctatgtgccggtg
gacgccgatgacccggaggagcgcgcagagatggtgttctccgaggggaacatcaacggc
gtgttcaccgacgagggcttccgcatgctctccccgcgcgcaggtggcgacaagcaccgc
ccgcagctcggcgacaccgcctggatcatcttcacctccggttcgaccggcaagccgaag
ggcgtggccgtcagccaccgctccgccgccgctttcgtcgacgccgaggcccagctcttc
ctggtcaactcccccggcggccccctcggacccgaagatcgcgtgctggccggcctgtcg
gtcgccttcgacgcgagctgcgaggagatgtggctggcatggcgccacggcgcctgcctg
gtgcctgcgccccgtagcctcgtccgctccggcatggacctcggcccctggctgatccgc
cgggacatcaccgtcgtctccaccgttcccaccctggccggcctgtggcccgccgaggcg
ctggacaacatccgcctgctcatcgtgggcggtgaggcctgctcccaggagctggtcgag
cgtctggccaccgaggaccgcgagatgtggaacacctacggtccgaccgaggcgaccgtc
gtcgcatccgcgacccagctgtacccggatcatccggtgggcatcgggctgccgttggcg
ggttgggatctgctcgtcgtcgatgaacaggaccagccggtcgaggtcggtcaggtaggt
gaactggtgatcggtggcgtaggtctggcccgctacctcgatcccgagaaggacgccgag
aagtacgcgcccatgcccaccgtcggctggccgcgtgcctaccgctccggcgaccacgtg
cgcctggaggaggacggcctgtacttcatcggccgtgtcgacgaccaggtgaagatcggc
ggccgccgcatcgaactcggcgaggtggaggcgaacgtcgccgccctgcccaacgtgtac
aactccgccgtcgccgtacagaagaccggcgcgaatcagtcggtgctggtcggttacgtc
tccctcgatgacccggagatcgatttcgaccacgaggccgcccaccagcgtctcgcggag
accatgcccgctgccctcgtcccgcgcatctgcgtgatggaggagctgccgatccgcacc
tccggaaaggtggacaagaaggcgctgccctggccgctgccgggcgtgggtgtggaggcc
accgacctcaaccccacggagacctggctcgccgagctgtgggtcgacgttctgggcacc
tccgtcgcggacgccgactccgacttcttcaccctcggcggcacctcgctcgccgccgct
accctggtcggccgcatccgccgacaggttcccaccgtcgcggtgcgcgacctctacgat
catccgcgtctgggctcgctcgccgaggccgtcgagtccatcgccaagaagtcaggtgtc
tcgcttgtcgacaccacccccgtcgaaccccgtgtggtccgcccggtaggcgcaggtacg
cgcctggcacagctgctgatccaggtcccgatgatgacgctgcaggccaccacctggctg
gggtggattctgctgggcggcaacttggcccgtctggcgggtgtggagtgggcggtgcac
acctcgtggtggctcatcgcgttcctgctcgtcgtgttcggctcccccgtcggccgcctg
ccgctgggcggactgggcgcacgtctgctcaccgccggcatcaggcccggcgactaccgc
cgcggcggcgccacccatcttcgcatctgggctgcggaacgctgggccgaggcgtcgggc
tcccattcgatctcgggtgccacctgggtcatctactacgcgcgttcgctcggggtgaag
atcggccggggcgtggacctgcactccctgcccccggtcaccggcctgctcacgctcggc
gaccactccgccatcgaacccgaggtggacatgtccggctactgggtcgacggtgacatc
ctgcgcgtcggcgccatcgatgtgggcagccaggcccgcgtcggcgcccgctccaccctg
cttccgggcaccgtcatcggcgcggacgcccatgtcgaggccggttccaccgtcaccggt
ggccgccccgtcaaaccgggcgcccgctggtcgggttcaccggcagagaaggtcggacgc
tccaaacaccgcttccccgacgagcacccgccgcgtcgcacccgttgggtgcccatctac
ggtctgacctctctgctgctcagtctgcagccgctggtggccatcgcactcggtgggctc
gtggttctcacactggtccagtacaccgacggcaacccgctgctcggtggggtggtgttc
gccccgctgggtggcctggtcgcgttcgccttctacatggtggccacctggctgggtgtg
cgcctgctctcgctcggcctgaaaccgggcgtgacaccggtacgttccttccacggctgg
cagctgtggaccatcgaacgcctgatggatgacgcccgcacctacctcttcccgctctac
gccggccagctcaccccgatgtggttgcgcagcctgggcgcgaagatcggccgcgacgtc
gaggtctccaccgccgtgatggtgcccaagctcaccgaggtacgcgacggtgccttcctc
gccgacgacaccctcatcggcggctacgagctcggcggcggctggatgctcaccggtgag
acccgcgtgggcaaacgcagcttcgtcggcaactccggcatcaccgggccgggacgcaag
cttccgaagaactcgctcgtggctgtcctgtcgtcgacgccgaagaaggccaaggccaac
accaactggtggggctccccgccggagcgtatgcgtcgtgtcctggtggatgccggcggt
ggcgaggctctgacctacaacccgggactcaaggtgaaggtgttccgcggattcatcgag
acgatgcgcctgctcgcgccgatggtgtcggcgatgctgctggccgcggtcgtcggaacg
ctctactggctgacggtcaacgtcggcgtgtgggccgcgtggctggccggtggcgtcacc
ctgatggtggccgggctggtggccatggtcatcacggtgctggtgaagtggttctgcgtg
ggtaagcaccgcccgggcgatcacccgctgtggagcgagttcgtgtggctcaacgagctg
caggacgcgttcgtcgagtcggtcgccgggccgtggttcctgcagcacaacctgggcgcc
ggcgagctcaacgtcgcgctgcgtgcgctcggtgtccgcatcggtcgcggcgcctggatc
gagacctactggttccccgagacggatctgtgtgtcgtcggccgcggtgcgtccgtcggc
ccgggaaccgtcgtgcagacacacctgttccaggatcgtgtcatgagcctcgactacgtc
accatcggtgacggagcgaccctcgccgcccactcggtggcactgccggccgccaccctc
ggcgagggcgcgaccgtcggcccgggctccctggtcatgcgtggcgaccaggtcccggcc
aacacggtgtggcagggcaacccgatcgagccgtggacgggcgtgaagtcctag
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