Campylobacter coli FB1: VC76_03475
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Entry
VC76_03475 CDS
T03870
Symbol
rluD_3
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ccof
Campylobacter coli FB1
Brite
KEGG Orthology (KO) [BR:
ccof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccof03009
]
VC76_03475 (rluD_3)
Enzymes [BR:
ccof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VC76_03475 (rluD_3)
Ribosome biogenesis [BR:
ccof03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VC76_03475 (rluD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
CHRDL_1_2_C
COMPASS-Shg1
DUF6246
Motif
Other DBs
NCBI-ProteinID:
AJW58117
UniProt:
A0A0Q2VUF9
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All DBs
Position
678700..679452
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AA seq
250 aa
AA seq
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MQEKAYKLLALQENISNREAKDLIDKGCVFSHGKKVVVARALMSDKTKFSIVKTSKPKVI
FEDENIIAINKPYAYISEELEKKFNAKLLNRLDKETSGVILLCKNEDFRKICIEEFKKQR
VYKSYIAVLDGILAEEIEIDEPILTIKTKNGALSKISKEGLSAVSIFTPIMMQAKKTLAK
IIIKTGRTHQIRVHAKFIKHGIIGDEKYAKISSDRMYLHSHEIRILNYQFKAELDSSFSK
LGFEIKNLDF
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaagcatataaacttttagctttgcaagaaaatatttcaaaccgcgaagca
aaagatttgatagataagggttgcgttttttctcatggtaaaaaggtagttgtagcaaga
gctttgatgagtgataagacgaaatttagcattgtaaaaactagcaagcctaaagtaatt
tttgaagatgaaaatatcatagccataaataaaccctatgcttatatcagtgaagaactt
gaaaaaaaattcaatgcaaagttacttaaccgtcttgataaagaaactagtggtgttata
ctgctttgtaaaaatgaagattttcgaaaaatatgcattgaagagtttaaaaaacaaaga
gtttataaaagctatatagctgttttggatggaattttagcagaagaaattgagattgat
gagcctatattaaccataaaaactaagaatggagctttgagcaaaatttctaaagagggt
ttaagcgcggtcagtatttttactcctattatgatgcaagctaaaaaaactttggctaaa
attatcattaaaacaggcagaacccatcaaataagagtgcatgctaaatttatcaagcat
ggaattataggagatgaaaaatatgctaaaatttcaagtgataggatgtatttgcatagt
catgaaattcgaattttaaattatcaatttaaggcagaattagattctagcttttcaaag
cttggttttgagataaaaaatttagatttttaa
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