Campylobacter coli FB1: VC76_05625
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Entry
VC76_05625 CDS
T03870
Symbol
arnB
Name
(GenBank) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
KO
K21131
GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase [EC:
4.2.1.168
]
Organism
ccof
Campylobacter coli FB1
Pathway
ccof00541
Biosynthesis of various nucleotide sugars
ccof01100
Metabolic pathways
ccof01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ccof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VC76_05625 (arnB)
Enzymes [BR:
ccof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.168 GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase
VC76_05625 (arnB)
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Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DUF3149
Motif
Other DBs
NCBI-ProteinID:
AJW58531
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Position
complement(1103278..1104447)
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AA seq
389 aa
AA seq
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MHNDYLLASSTWDEKELQAIQDVIKSDMFTMGKKVAEFEKDFAKFVGSKYAVMTSSGSTA
NLIATAALFYTKNPKLKRGDEVIVPAVSWSTTYYPLYQYGLKLKFVDIDLETLNYDLDAL
SSAISDKTKMIMVVNLLGNPNDFDAINDLIKGKDIILLEDNCESMGAEYKGKQAGTFGIM
GTFSTFFSHHMATMEGGFVVTDDEELYHILLCLRAHGWTRNLPKENLVANKSDDWFSESF
RFVLPGYNVRPVEMSGAIGIEQLKKLPMFLKHRRENAKLFCEYFQNHPDFIMQKEIGSSS
WFGFSLVIRPNSKLQRKDIIKKLEENNIEYRPIATGDFTQNEVMKYFDYEIFGELQNAKI
VHKNGFFVGNHQFDIGEQIDLFSKVMNKL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcataatgattatttgttagcctcatcaacttgggatgagaaagaattacaagcaata
caagatgttattaaaagcgatatgtttactatgggcaaaaaggtagccgaatttgaaaaa
gattttgccaaatttgtgggttctaagtatgctgttatgacaagctcaggttctactgca
aatttgatagcaactgcagcattattttatactaaaaatcctaagttaaaaagaggagat
gaagttatagttcctgcggtatcatggagtactacttattatccactttatcagtatggt
ttgaagttaaaatttgtagatatagatctagaaacactaaattatgatttggatgcttta
agcagcgctattagcgataaaacaaaaatgattatggttgtaaatttattaggcaatcct
aatgattttgatgcgattaatgatcttataaaaggaaaagatattatcttattagaagat
aactgcgaatcaatgggtgcagagtataaaggaaaacaagctggaacttttggcatcatg
gggactttctcgacatttttttcccatcacatggctacgatggaaggtggttttgttgtt
acagatgatgaagaattgtatcatatattgctttgtttaagagcacatggatggactaga
aatttaccaaaagaaaatttagtggctaataaaagcgatgattggtttagtgagtcattt
cgttttgtattgccaggatacaatgtgcgtcctgtagaaatgagtggggctataggcata
gagcaacttaaaaaattacctatgtttttaaaacaccgtagggaaaatgctaaattattt
tgtgagtattttcaaaatcatcctgattttatcatgcaaaaagaaatcggaagtagctct
tggtttggtttttcattagtgattagaccaaattctaaattgcaaagaaaagatattatt
aaaaaattagaagaaaataacatagagtatcgtcctatagctacgggtgattttactcaa
aatgaagtaatgaaatattttgattatgaaatttttggtgagcttcagaatgcaaaaatt
gtacataaaaatggtttttttgtaggaaaccatcaatttgatattggtgaacaaattgat
ttatttagtaaagtaatgaataaattataa
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