Campylobacter coli FB1: VC76_06245
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Entry
VC76_06245 CDS
T03870
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccof
Campylobacter coli FB1
Pathway
ccof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VC76_06245 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccof03019
]
VC76_06245 (pnp)
03016 Transfer RNA biogenesis [BR:
ccof03016
]
VC76_06245 (pnp)
Enzymes [BR:
ccof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
VC76_06245 (pnp)
Messenger RNA biogenesis [BR:
ccof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
VC76_06245 (pnp)
Transfer RNA biogenesis [BR:
ccof03016
]
Prokaryotic type
tRNA degradation factors
VC76_06245 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_RRP5
DUF2501
S1_2
Mrpl_C
Motif
Other DBs
NCBI-ProteinID:
AJW58654
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All DBs
Position
1225213..1227429
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AA seq
738 aa
AA seq
DB search
MLNIFKSLTNLLYGKKGQMMQYSIEINGNLEVFDIEKVAKQAAGAVLMRQGKSVVLAAVA
REEKPVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKG
YAYPTQIVVMVLSADPQVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGRIEEKFVLNPN
NEELKNSTLDLYVAGVKDELLMIEMRALPNQKEDEIFIEVPYADVLTQTTSQSMNELSED
EILEALSLAQKAILNGSNAYEEAFLKHKKSSDLNFKDEIENFELLAFIENNFHDQIVQAI
NQMAKSERASELNKIAEKILNFESATKWDEESILNALAKVKHKIVRSQILNTKKRADGRN
LNEVRPIAIETNILPNAHGSCLFTRGQTQALVVATLGSENDAQMVDVLTEKNPINERFMV
NYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSIDENYPYIIRLVSEILESNGSSSM
ATVCGGSLALRAAGVPSLKLVAGVAMGLIFEGDQYAILTDIMGLEDHDGDMDFKVAGSKD
GITALQMDIKLGGIDQKILKEALYQAKEGRIHILNIMEEALKEIVVNEEVLPKLELFNVD
PSKIVDIIGQAGKTIKEIIEKFGVSIDLDREKGEVKIAGNENEQIKAAKDYIINITSSQK
NNKKGFKEKDLSNFEIGEEFEGKVKKITNFGAFIELKNGIDGLLHNSKSKNLNLSENQIL
KVKVSEIKNGKISVDLCE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaatatttttaaaagtttgacaaatttattatatggaaaaaaaggacaaatgatg
caatacagtatagaaatcaatggcaatttagaagtattcgatatagaaaaagtagctaaa
caagctgcaggtgctgtgcttatgcgacaaggaaaaagtgtcgttttagccgcggttgca
agagaggaaaagcctgttgaagaagactttttgcctctaactgttcagtatatagaaaaa
gcctatgcagcaggaaaaatcccgggcggctatgttaaaagagaaaccaaaccaagcgat
gcagaaactttaactgcacgcattatagacagaagtttgcgtccactttttccaaaagga
tatgcctacccgacacaaattgtcgtaatggttctttctgctgatcctcaagtagatctt
caagttatgagtctaaatgcagcaagcgtagcactttatcttagtgatattcctatgaaa
gctcctgtttgtggagttcgcataggtcgcatagaagaaaaatttgtcctaaatccaaac
aatgaagaacttaaaaatagcacccttgatctttatgtagcaggggttaaagatgagctt
ttaatgatagaaatgcgtgctttacctaatcaaaaagaagatgaaatctttatcgaagtt
ccttatgcagatgttttaacccaaacaacttcacaaagcatgaatgaacttagcgaagat
gaaattttagaagcgctaagtctagcccaaaaagctatattaaatggctctaatgcttat
gaagaagcttttttgaaacataaaaaatcaagcgatttaaatttcaaagatgaaatagaa
aatttcgaacttctcgcctttatagaaaataattttcacgatcaaatcgtacaggctatc
aatcaaatggcaaaaagtgaaagagcgagtgagttaaataaaattgctgaaaaaatatta
aattttgaaagcgcgacaaaatgggatgaagaaagtattttaaatgccctagcaaaagtc
aaacataaaatcgttcgtagccaaattttaaatacaaaaaaaagagcagatggtagaaat
ttaaatgaagtgcgtcctattgccatagaaacaaatattttacctaatgcacatggctct
tgcctttttacacgcggacaaactcaagctttggttgtggcgactttaggtagtgaaaat
gatgcgcaaatggttgatgtgttaaccgaaaaaaatcctatcaatgaacgctttatggtt
aattataattttccaggtttttcagtaggcgaggcaagccctatcaaagcacctggaaga
agagagttaggacatggaaacttagccaaaagagccctttatccaagcatagatgaaaat
tatccttatattatccgtttggtaagtgaaattttagaaagcaatggctctagttctatg
gcaacggtttgtggagggtctttagccttaagagcagcgggagtacctagcttaaaactt
gtagcaggagtagctatggggcttatttttgaaggcgatcaatatgctattttaactgat
atcatgggcttagaagatcatgatggggatatggattttaaagtagcaggtagcaaagac
ggtatcacagccttacaaatggatatcaaattgggcggtattgatcaaaaaatactcaaa
gaagccttgtatcaagctaaagaaggtagaattcatatcttaaatatcatggaagaagca
cttaaggaaattgttgttaatgaagaggtattgccaaaactcgagcttttcaatgttgat
ccttcaaaaatagtcgatatcataggtcaagctggaaaaactatcaaagaaattattgaa
aaatttggtgtttctatagacttagatcgtgaaaagggtgaagtaaaaattgcgggcaat
gaaaacgaacaaattaaagccgcaaaagattatattatcaatatcacaagttctcaaaaa
aataataaaaaaggctttaaagaaaaagatctatcaaactttgaaatcggcgaagaattt
gaaggaaaagtcaaaaaaatcacgaattttggagcctttatagaacttaaaaatggaatt
gatggcttgcttcataattctaaaagtaaaaatctcaatttaagtgaaaatcaaatttta
aaagtaaaagtaagtgagattaaaaatggcaaaatctctgtggatttatgcgagtga
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