Campylobacter coli FB1: VC76_08485
Help
Entry
VC76_08485 CDS
T03870
Name
(GenBank) Ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ccof
Campylobacter coli FB1
Pathway
ccof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VC76_08485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccof03019
]
VC76_08485
Messenger RNA biogenesis [BR:
ccof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VC76_08485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AJW59090
UniProt:
A0A3Z9H1I6
LinkDB
All DBs
Position
complement(1635682..1637712)
Genome browser
AA seq
676 aa
AA seq
DB search
MNENNKGNSENTNNPNSNSKNNKRYKYRNRRKKLADSISENSQNSTHEFSNNEKINTKKN
STNTQPLEGENVEKPSEKKKKRNRNLPSKLTGNEDWQIALAECIEANRVSHENRLHPLKY
NNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYVR
KIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWFR
PVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDLG
RLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRVY
QAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTTG
SQGETMSALYRMATDEHKFIKIKPSDQIIISAKAIPGNEASVSAVLDYLLKAGAKVAYQE
FSEIHVSGHASIEEQKLMLTLVKPKFFLPVHGEYNHINKHKETAIKCGIPEKNIYLMSDG
DQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQLDKASKT
LINKPRVFSYGLVADKQDHAFSKEMAEVLGQFFVNVKDEVLNDPRFLENQIRQVLRKHIF
RKIKKYPTIVPTIFVM
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacaacaaaggaaatagtgaaaatacaaacaatcctaactcaaattcaaaa
aacaacaagcgctataaatacagaaatcgtagaaaaaaattagccgattctatcagtgaa
aattctcaaaattcaactcatgaattttctaacaacgaaaagataaataccaagaaaaat
tctacaaatactcaacctttagagggtgaaaatgtagaaaaaccaagtgagaaaaagaaa
aaaagaaatcgcaatctcccttctaaacttaccggaaatgaagattggcaaatcgcgctt
gctgagtgtatagaggcaaatcgtgtttcacatgaaaatcgcttacatcctttaaaatac
aataattctagcgagcataaaattcgcatcactccactaggtggcttaggagaaattggt
ggaaatatcagtgtttttgaaaccaataaagatgcaattatagtagatataggtatgagt
tttcctgatggaactatgcatggggtagatattatcatccctgattttgattatgtaaga
aagattaaagataaaattcgtggtatagtgatcactcatgcacacgaagatcatatcggt
gcagtgccttatttctttaaagaattccaatttcctatctacgctacacctttggcttta
ggaatgatttcaaacaaatttgaagaacatggcttaaaagcagaacgcaaatggtttcgc
cctgtagaaaaacgccgtgtttatgagataggcgaatttgatatagagtggatccacatc
acgcattctatcattgatgcttcagcacttgcgatcaaaacaaaagcaggaacgattatc
cacacaggtgattttaaaattgatcaaactccaatcgatggctatccaacagacttagga
cgtttggcacattatggagaagaaggggttttatgtcttttaagcgatagtacaaattcg
tacaaagaaggttatacaaaaagtgaaagctccgtagggccaacttttgatcaaatcttt
gcacgtaccaaaggtagggtgatcatgagtacttttagctcaaacatccaccgtgtttat
caagctattacttatggtttaaaatacggcagaaaagtttgtgttatcggtcgttctatg
gagagaaatctttataccactatggaattaggttatattaagctcgatagaaaaattttt
attgatgcagatgaggttagcaagtataaagacaatgaagtgcttatcgtaaccacagga
agtcaaggtgaaactatgagtgcgctttatagaatggcaacagatgagcataaatttata
aaaataaagccaagcgatcaaatcatcatttcagctaaagctatcccaggcaatgaagcg
agtgtttcagcggtgcttgattatcttttaaaagcgggtgctaaagtagcgtatcaggaa
tttagcgaaattcatgtaagcgggcatgcaagtatagaagagcaaaaattaatgcttact
ctagttaagcctaaattcttcttgccagtacatggagaatacaatcatatcaataaacac
aaagaaacagctataaaatgtggaattcctgaaaaaaatatttatctcatgagcgatggc
gatcaagtagaactttgccaaaaatatgttaaacgcataaaaaccgtaaaaacaggtaaa
gtttttgtagataatcaaatcaataaacaaatcgccgatgatgtagtaattgatcgtcaa
aaacttgcagatagcggtatagttgtcatcattgcacagcttgataaagcaagtaaaaca
ttgattaataaaccaagagtatttagctatggacttgtagcagataaacaagatcatgct
ttttctaaagaaatggcagaggttttaggacaattttttgtcaatgttaaagatgaagtg
cttaatgatccaagatttttggaaaatcaaattcgtcaagtattgagaaaacatattttt
agaaagattaaaaaatatccaaccatagttccaactatttttgtaatgtaa
DBGET
integrated database retrieval system
